RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 OPN3Q9H1Y3 402 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 ABCG8Q9H221 673 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 NMRAL1Q9HBL8 299 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 MED9Q9NWA0 146 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 RBFOX1Q9NWB1 397 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PTTG3PQ9NZH4 202 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PISDQ9UG56 409 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 GPR160Q9UJ42 338 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CLCA2Q9UQC9 943 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 MKI67P46013 3256 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 FABP12A6NFH5 140 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PLOD3O60568 738 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 VPS26AO75436 327 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 LBPP18428 481 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 DNASE1P24855 282 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 KCNQ1P51787 676 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 GPR143P51810 404 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CDH6P55285 790 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 HNRNPKP61978 463 aaKnown RBP eCLIP9.05□□□□□ -0.961e-6■■■□□ 16
PTPRA-204ENST00000380393 MC2RQ01718 297 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SMCO1Q147U7 214 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.05□□□□□ -0.964e-8■■□□□ 14.3
PTPRA-204ENST00000380393 NHLRC3Q5JS37 347 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 MARCH8Q5T0T0 291 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 THEM4Q5T1C6 240 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 TRIQKQ629K1 86 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PIWIL4Q7Z3Z4 852 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 APOBEC3FQ8IUX4 373 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 OR6B3Q8NGW1 331 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CRYGNQ8WXF5 182 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 NCKAP1Q9Y2A7 1128 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 DLGAP4Q9Y2H0 992 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 HTTP42858 3142 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 LCHNA4D1U4 455 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SPATA31C2B4DYI2 1134 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 UBXN8O00124 270 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 RGS11O94810 467 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 STSP08842 583 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 NMBP08949 121 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PTPRAP18433 802 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SLC6A2P23975 617 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PIK3CGP48736 1102 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 BCAR1P56945 870 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 KIAA1024LP59773 190 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 YBX1P67809 324 aaKnown RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 CHRNB3Q05901 458 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SGCGQ13326 291 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 CUL2Q13617 745 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 USP10Q14694 798 aaKnown RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 MANEAQ5SRI9 462 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 LIPMQ5VYY2 423 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 JOSD2Q8TAC2 188 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 DNAJB14Q8TBM8 379 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF516Q92618 1163 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 NSMCE2Q96MF7 247 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 NSMCE4AQ9NXX6 385 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 CA5BQ9Y2D0 317 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PCDHA11Q9Y5I1 949 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 LOC102723532A0A0G2JNH3 316 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 C9JVG2 144 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 KIAA0355O15063 1070 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 MED6O75586 246 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 GRAP2O75791 330 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PAK4O96013 591 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 CRYBA1P05813 215 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 GJA1P17302 382 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 NUDT6P53370 316 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SESN2P58004 480 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 MBTD1Q05BQ5 628 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 POU4F2Q12837 409 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 GK2Q14410 553 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 UAP1L1Q3KQV9 507 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SEZ6L2Q6UXD5 910 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 C3P1Q6ZMU1 363 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 OTOP2Q7RTS6 562 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 HSD17B13Q7Z5P4 300 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 GALNT5Q7Z7M9 940 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 TGIF2LXQ8IUE1 241 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 GPD1LQ8N335 351 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF454Q8N9F8 522 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 ZC3H10Q96K80 434 aaKnown RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SLC38A2Q96QD8 506 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 LGMNQ99538 433 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 TGIF2Q9GZN2 237 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 SUV39H2Q9H5I1 410 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 EXOSC4Q9NPD3 245 aaKnown RBP9.04□□□□□ -0.96
PTPRA-204ENST00000380393 GPATCH2LQ9NWQ4 482 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 MED11Q9P086 117 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 CA14Q9ULX7 337 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 GLYATL1P3A0A0U1RQE8 302 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 KCNK1O00180 336 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PPM1DO15297 605 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PRPSAP2O60256 369 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 STX11O75558 287 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 F9P00740 461 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PDGFRAP16234 1089 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 KDELR1P24390 212 aa9.04□□□□□ -0.96
PTPRA-204ENST00000380393 PTPN7P35236 360 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms