RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 PROKR2Q8NFJ6 384 aa7□□□□□ -1.29
DDX58-202ENST00000379883 PUM2Q8TB72 1066 aaKnown RBP eCLIP7□□□□□ -1.29
DDX58-202ENST00000379883 ACOT12Q8WYK0 555 aa7□□□□□ -1.29
DDX58-202ENST00000379883 PTP4A1Q93096 173 aa7□□□□□ -1.29
DDX58-202ENST00000379883 COQ10AQ96MF6 247 aa7□□□□□ -1.29
DDX58-202ENST00000379883 CDK15Q96Q40 435 aa7□□□□□ -1.29
DDX58-202ENST00000379883 DOHHQ9BU89 302 aa7□□□□□ -1.29
DDX58-202ENST00000379883 ACTR6Q9GZN1 396 aa7□□□□□ -1.29
DDX58-202ENST00000379883 SAV1Q9H4B6 383 aaPredicted RBP7□□□□□ -1.29
DDX58-202ENST00000379883 GALNT9Q9HCQ5 603 aa7□□□□□ -1.29
DDX58-202ENST00000379883 EVA1BQ9NVM1 165 aa7□□□□□ -1.29
DDX58-202ENST00000379883 HPF1Q9NWY4 346 aa7□□□□□ -1.29
DDX58-202ENST00000379883 NDUFB11Q9NX14 153 aa7□□□□□ -1.29
DDX58-202ENST00000379883 HCN3Q9P1Z3 774 aa7□□□□□ -1.29
DDX58-202ENST00000379883 SRRDQ9UH36 339 aa7□□□□□ -1.29
DDX58-202ENST00000379883 MLXQ9UH92 298 aa7□□□□□ -1.29
DDX58-202ENST00000379883 SCP2D1Q9UJQ7 156 aa7□□□□□ -1.29
DDX58-202ENST00000379883 NUBP2Q9Y5Y2 271 aa7□□□□□ -1.29
DDX58-202ENST00000379883 GJA3Q9Y6H8 435 aa7□□□□□ -1.29
DDX58-202ENST00000379883 J3KR12 359 aa7□□□□□ -1.29
DDX58-202ENST00000379883 HAS3O00219 553 aa7□□□□□ -1.29
DDX58-202ENST00000379883 PRKYO43930 277 aa7□□□□□ -1.29
DDX58-202ENST00000379883 ATG13O75143 517 aa7□□□□□ -1.29
DDX58-202ENST00000379883 ZNF169Q14929 603 aaPredicted RBP7□□□□□ -1.29
DDX58-202ENST00000379883 ABRAXAS2Q15018 415 aa7□□□□□ -1.29
DDX58-202ENST00000379883 GPR162Q16538 588 aa7□□□□□ -1.29
DDX58-202ENST00000379883 MICAQ29983 383 aa7□□□□□ -1.29
DDX58-202ENST00000379883 MPP7Q5T2T1 576 aa7□□□□□ -1.29
DDX58-202ENST00000379883 OR4F3Q6IEY1 312 aa7□□□□□ -1.29
DDX58-202ENST00000379883 CNIH2Q6PI25 160 aa7□□□□□ -1.29
DDX58-202ENST00000379883 ATCAYQ86WG3 371 aa7□□□□□ -1.29
DDX58-202ENST00000379883 TMIEQ8NEW7 156 aa7□□□□□ -1.29
DDX58-202ENST00000379883 OR4M2Q8NGB6 313 aa7□□□□□ -1.29
DDX58-202ENST00000379883 PDXPQ96GD0 296 aa7□□□□□ -1.29
DDX58-202ENST00000379883 PPP1R16BQ96T49 567 aa7□□□□□ -1.29
DDX58-202ENST00000379883 NELL2Q99435 816 aa7□□□□□ -1.29
DDX58-202ENST00000379883 TMEM43Q9BTV4 400 aa7□□□□□ -1.29
DDX58-202ENST00000379883 NLNQ9BYT8 704 aa7□□□□□ -1.29
DDX58-202ENST00000379883 TLR8Q9NR97 1041 aaKnown RBP7□□□□□ -1.29
DDX58-202ENST00000379883 SLC25A37Q9NYZ2 338 aa7□□□□□ -1.29
DDX58-202ENST00000379883 FAM8A1Q9UBU6 413 aa7□□□□□ -1.29
DDX58-202ENST00000379883 OR51F1A6NGY5 319 aa7□□□□□ -1.29
DDX58-202ENST00000379883 C19orf81C9J6K1 198 aa7□□□□□ -1.29
DDX58-202ENST00000379883 TLR4O00206 839 aa7□□□□□ -1.29
DDX58-202ENST00000379883 PLA2G10O15496 165 aa7□□□□□ -1.29
DDX58-202ENST00000379883 HLA-DQB1P01920 261 aa7□□□□□ -1.29
DDX58-202ENST00000379883 APOC1P02654 83 aa7□□□□□ -1.29
DDX58-202ENST00000379883 S100A9P06702 114 aaKnown RBP7□□□□□ -1.29
DDX58-202ENST00000379883 USP17L7P0C7H9 530 aa7□□□□□ -1.29
DDX58-202ENST00000379883 ODC1P11926 461 aa7□□□□□ -1.29
DDX58-202ENST00000379883 ENGP17813 658 aa7□□□□□ -1.29
DDX58-202ENST00000379883 NDUFV1P49821 464 aa7□□□□□ -1.29
DDX58-202ENST00000379883 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
DDX58-202ENST00000379883 FBXO48Q5FWF7 155 aa7□□□□□ -1.29
DDX58-202ENST00000379883 SIRPB2Q5JXA9 342 aa7□□□□□ -1.29
DDX58-202ENST00000379883 RASGRP3Q8IV61 690 aa7□□□□□ -1.29
DDX58-202ENST00000379883 NLGN1Q8N2Q7 840 aa7□□□□□ -1.29
DDX58-202ENST00000379883 SLC5A8Q8N695 610 aa7□□□□□ -1.29
DDX58-202ENST00000379883 C3orf58Q8NDZ4 430 aa7□□□□□ -1.29
DDX58-202ENST00000379883 TTC16Q8NEE8 873 aa7□□□□□ -1.29
DDX58-202ENST00000379883 TMEM163Q8TC26 289 aa7□□□□□ -1.29
DDX58-202ENST00000379883 OPALINQ96PE5 141 aa7□□□□□ -1.29
DDX58-202ENST00000379883 SORCS2Q96PQ0 1159 aa7□□□□□ -1.29
DDX58-202ENST00000379883 BARD1Q99728 777 aaKnown RBP7□□□□□ -1.29
DDX58-202ENST00000379883 P2RY13Q9BPV8 354 aa7□□□□□ -1.29
DDX58-202ENST00000379883 FAM126AQ9BYI3 521 aaPredicted RBP7□□□□□ -1.29
DDX58-202ENST00000379883 TTYH1Q9H313 450 aaPredicted RBP7□□□□□ -1.29
DDX58-202ENST00000379883 UXTQ9UBK9 157 aaPredicted RBP7□□□□□ -1.29
DDX58-202ENST00000379883 TRPS1Q9UHF7 1281 aa7□□□□□ -1.29
DDX58-202ENST00000379883 PADI2Q9Y2J8 665 aa7□□□□□ -1.29
DDX58-202ENST00000379883 MRPS7Q9Y2R9 242 aaKnown RBP7□□□□□ -1.29
DDX58-202ENST00000379883 H3BM21 787 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 GFRA2O00451 464 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 E2F3O00716 465 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 CPSF4O95639 269 aaKnown RBP6.99□□□□□ -1.29
DDX58-202ENST00000379883 TXNP10599 105 aaKnown RBP6.99□□□□□ -1.29
DDX58-202ENST00000379883 EPB42P16452 691 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 LMO2P25791 158 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 LHX1P48742 406 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 CDH12P55289 794 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 ERVK-21P61565 698 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 VLDLRP98155 873 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 LRRC74AQ0VAA2 488 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 COL19A1Q14993 1142 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 FCN2Q15485 313 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 RETSATQ6NUM9 610 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 SLC27A1Q6PCB7 646 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 GALNT10Q86SR1 603 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 RTL3Q8N8U3 475 aaKnown RBP6.99□□□□□ -1.29
DDX58-202ENST00000379883 C11orf65Q8NCR3 313 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 OR8K3Q8NH51 312 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 FANK1Q8TC84 345 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 CSGALNACT1Q8TDX6 532 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 EDEM1Q92611 657 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 NECTIN4Q96NY8 510 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 WACQ9BTA9 647 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 POLR1EQ9GZS1 481 aaKnown RBP6.99□□□□□ -1.29
DDX58-202ENST00000379883 OR51J1Q9H342 316 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 MINDY3Q9H8M7 445 aa6.99□□□□□ -1.29
DDX58-202ENST00000379883 AGO3Q9H9G7 860 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms