RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ATP6V1G3Q96LB4 118 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 CCNL2Q96S94 520 aaPredicted RBP11.34□□□□□ -0.59
PCNA-201ENST00000379143 SH3GL2Q99962 352 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 GSTO2Q9H4Y5 243 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 GPN2Q9H9Y4 310 aaPredicted RBP11.34□□□□□ -0.59
PCNA-201ENST00000379143 ANKHQ9HCJ1 492 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 PSD3Q9NYI0 1048 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 IFT80Q9P2H3 777 aaPredicted RBP11.34□□□□□ -0.59
PCNA-201ENST00000379143 TRPS1Q9UHF7 1281 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
PCNA-201ENST00000379143 SNX6Q9UNH7 406 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 RAXQ9Y2V3 346 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 RNF11Q9Y3C5 154 aa11.34□□□□□ -0.59
PCNA-201ENST00000379143 A0A088AWK7 358 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 TMEM120BA0PK00 339 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 LRIT2A6NDA9 550 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 HMGB1P1B2RPK0 211 aaPredicted RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 FOXE1O00358 373 aaPredicted RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 NPHS1O60500 1241 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 NSA2O95478 260 aaKnown RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 ESRRBO95718 433 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 ENO1P06733 434 aaKnown RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 BPGMP07738 259 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 ALOX12P18054 663 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 ZNF10P21506 573 aaPredicted RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 DLSTP36957 453 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 SERPINB4P48594 390 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 ZNF33BQ06732 778 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 TGM3Q08188 693 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 GALNT1Q10472 559 aaPredicted RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 ZRSR2Q15696 482 aaKnown RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 ADPRMQ3LIE5 342 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 TMEM35AQ53FP2 167 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 FRG2Q64ET8 278 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 FAM199XQ6PEV8 388 aaPredicted RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 CHSY3Q70JA7 882 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 RPS27LQ71UM5 84 aaKnown RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 NUDCD3Q8IVD9 361 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 SPACA3Q8IXA5 215 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 AFAP1L2Q8N4X5 818 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 HUS1BQ8NHY5 278 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 ZNF473Q8WTR7 871 aaKnown RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 GAL3ST3Q96A11 431 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 COL26A1Q96A83 441 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 MMABQ96EY8 250 aaPredicted RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 CMTM7Q96FZ5 175 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 FRG2BQ96QU4 278 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 MACROD1Q9BQ69 325 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 SLC29A3Q9BZD2 475 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 REXO4Q9GZR2 422 aaKnown RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 CHST8Q9H2A9 424 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 ELOVL6Q9H5J4 265 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 CLK4Q9HAZ1 481 aaKnown RBP11.33□□□□□ -0.6
PCNA-201ENST00000379143 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 NKIRAS1Q9NYS0 192 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 CROTQ9UKG9 612 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 PPT2Q9UMR5 302 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 PADI2Q9Y2J8 665 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 PCDHGA6Q9Y5G7 932 aa11.33□□□□□ -0.6
PCNA-201ENST00000379143 FLNBO75369 2602 aaKnown RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 A0A0A6YYC8 382 aaPredicted RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 I3L1I5 382 aaPredicted RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 FOXS1O43638 330 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 SNUPNO95149 360 aaKnown RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 KRT6AP02538 564 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 STATHP02808 62 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 KRT6BP04259 564 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 DHRS4L1P0CG22 281 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 TSPAN8P19075 237 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 FBLP22087 321 aaKnown RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 PTX3P26022 381 aaPredicted RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 KRT6CP48668 564 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 ARFIP1P53367 373 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 HYAL2Q12891 473 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 DNASE1L3Q13609 305 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 DSG2Q14126 1118 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 NCF4Q15080 339 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 TOR1AIP1Q5JTV8 583 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 ARHGAP40Q5TG30 622 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 HHATQ5VTY9 493 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 TRIM40Q6P9F5 258 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 OVCH1Q7RTY7 1134 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 VN1R5Q7Z5H4 357 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 OR2L5Q8NG80 312 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 PPP1R14CQ8TAE6 165 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 ZCCHC10Q8TBK6 192 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 WDR20Q8TBZ3 569 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 UTP15Q8TED0 518 aaKnown RBP11.32□□□□□ -0.6
PCNA-201ENST00000379143 AGAP11Q8TF27 550 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 CT55Q8WUE5 264 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 ARL8AQ96BM9 186 aa11.32□□□□□ -0.6
PCNA-201ENST00000379143 MS4A6EQ96DS6 147 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms