RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 STK19P49842 368 aaPredicted RBP17.31■□□□□ 0.36
GNE-201ENST00000377902 MADCAM1Q13477 382 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 DOC2AQ14183 400 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 PTGES3Q15185 160 aaKnown RBP17.31■□□□□ 0.36
GNE-201ENST00000377902 MICAQ29983 383 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 ZNF385BQ569K4 471 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 LMNTD1Q8N9Z9 388 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 OR4A15Q8NGL6 344 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 WDR20Q8TBZ3 569 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 MED8Q96G25 268 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 RAD9AQ99638 391 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 DDX28Q9NUL7 540 aaKnown RBP17.31■□□□□ 0.36
GNE-201ENST00000377902 TMEM202A6NGA9 273 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 EIF2S1P05198 315 aaKnown RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 ANXA4P09525 319 aaPredicted RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 CBSLP0DN79 551 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 CKMT1AP12532 417 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 CBSP35520 551 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 CCSAPQ6IQ19 270 aaPredicted RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 FAM180BQ6P0A1 224 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 OR5AK3PQ8NH89 298 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 NFKBIDQ8NI38 313 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 FCRL1Q96LA6 429 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 CEP19Q96LK0 163 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 MOV10Q9HCE1 1003 aaKnown RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 EXOSC4Q9NPD3 245 aaKnown RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 CCDC88CQ9P219 2028 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 AGAP14A8MT82 685 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 APOA1P02647 267 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 CTSOP43234 321 aaPredicted RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 MVDP53602 400 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 NPAS3Q8IXF0 933 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 C11orf65Q8NCR3 313 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 WDR36Q8NI36 951 aaKnown RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
GNE-201ENST00000377902 VOPP1Q96AW1 172 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 OR2A14Q96R47 310 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 IL4I1Q96RQ9 567 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 SLC30A2Q9BRI3 323 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 BARHL1Q9BZE3 327 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 TRIM39Q9HCM9 518 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 ZNF221Q9UK13 617 aa17.3■□□□□ 0.36
GNE-201ENST00000377902 EXO1Q9UQ84 846 aaKnown RBP17.3■□□□□ 0.36
GNE-201ENST00000377902 ANKRD34BA5PLL1 514 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 WWP2O00308 870 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 ADAMDEC1O15204 470 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 RPLP2P05387 115 aaKnown RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 IDSP22304 550 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 RPS19P39019 145 aaKnown RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 FEN1P39748 380 aaKnown RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 DEFA1P59665 94 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 DEFA3P59666 94 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 HBA1P69905 142 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 LEXMQ3ZCV2 418 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 FBXO43Q4G163 708 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 MFSD14CQ5VZR4 134 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 HS6ST3Q8IZP7 471 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 FAM129BQ96TA1 746 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 CLEC2DQ9UHP7 191 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 MKLN1Q9UL63 735 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 WBP11Q9Y2W2 641 aaKnown RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 NINQ8N4C6 2090 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 PLXNB3Q9ULL4 1909 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 GNG14A0A1W2PPG7 69 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 SAP18O00422 153 aaKnown RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 HOXC11O43248 304 aaPredicted RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 GUCY1B2O75343 617 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 KRT75O95678 551 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 C8GP07360 202 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 GALTP07902 379 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 IGFBP1P08833 259 aaPredicted RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 C1SP09871 688 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 PCGF2P35227 344 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 SOX6P35712 828 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 CCL23P55773 120 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 MC1RQ01726 317 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 TAF12Q16514 161 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 BAK1Q16611 211 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 WDR53Q7Z5U6 358 aaPredicted RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 UBQLNLQ8IYU4 475 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 DCAF4L2Q8NA75 395 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 GPR151Q8TDV0 419 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 ADAMTS19Q8TE59 1207 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 CIDECQ96AQ7 238 aaPredicted RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 TRMT61AQ96FX7 289 aaKnown RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 MCCC1Q96RQ3 725 aaPredicted RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 PLSCR3Q9NRY6 295 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 SPATA6Q9NWH7 488 aaPredicted RBP17.29■□□□□ 0.36
GNE-201ENST00000377902 POFUT2Q9Y2G5 429 aa17.29■□□□□ 0.36
GNE-201ENST00000377902 MKI67P46013 3256 aaKnown RBP17.28■□□□□ 0.36
GNE-201ENST00000377902 PRAMEF33A0A0G2JMD5 474 aa17.28■□□□□ 0.36
GNE-201ENST00000377902 TFECO14948 347 aaPredicted RBP17.28■□□□□ 0.36
GNE-201ENST00000377902 DPM1O60762 260 aa17.28■□□□□ 0.36
GNE-201ENST00000377902 PRAMEF10O60809 474 aa17.28■□□□□ 0.36
GNE-201ENST00000377902 SEMA3DO95025 777 aa17.28■□□□□ 0.36
GNE-201ENST00000377902 OR56A5P0C7T3 313 aa17.28■□□□□ 0.36
GNE-201ENST00000377902 FLT3LGP49771 235 aa17.28■□□□□ 0.36
GNE-201ENST00000377902 HNMTP50135 292 aa17.28■□□□□ 0.36
GNE-201ENST00000377902 CSTF3Q12996 717 aaKnown RBP17.28■□□□□ 0.36
GNE-201ENST00000377902 TAB1Q15750 504 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms