RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 VASH1Q7L8A9 365 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 APCDD1Q8J025 514 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 B3GNT7Q8NFL0 401 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 OR9Q2Q8NGE9 314 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 AGAP4Q96P64 663 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 NEDD4LQ96PU5 975 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 CEP44Q9C0F1 390 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 ADPRHL2Q9NX46 363 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 PEX16Q9Y5Y5 336 aa13.59□□□□□ -0.23
CLCNKA-202ENST00000375692 LINC00854A0A1B0GVQ3 168 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 J3KTA2 159 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 MFN2O95140 757 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 LINC00271P0C7V0 271 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 HLA-EP13747 358 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 BCL2L1Q07817 233 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 VEZF1Q14119 521 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 TSTQ16762 297 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 ANGPTL8Q6UXH0 198 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 LRRC70Q7Z2Q7 622 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 OR8H2Q8N162 312 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 L3MBTL4Q8NA19 623 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 CSGALNACT1Q8TDX6 532 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 DOHHQ9BU89 302 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 FAM8A1Q9UBU6 413 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 LTBP2Q14767 1821 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 ALPK3Q96L96 1907 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 PRAMEF25A6NGN4 478 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 PDZK1P1A8MUH7 402 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 LOC110117498-PIK3R3F6TDL0 507 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 IDH3BO43837 385 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 APOA1P02647 267 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 HIST1H2AGP0C0S8 130 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 GABRB1P18505 474 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 HIST1H2ADP20671 130 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 SPAM1P38567 509 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 SLC6A12P48065 614 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 SPIBQ01892 262 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 ABRQ12979 859 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 DMC1Q14565 340 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 EXOC3L2Q2M3D2 409 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 GGTA1PQ4G0N0 100 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 ATP13A5Q4VNC0 1218 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 ATAD3CQ5T2N8 411 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 MLIPQ5VWP3 458 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 MSANTD1Q6ZTZ1 278 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 NRARPQ7Z6K4 114 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 OR6F1Q8NGZ6 308 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 HIST1H2AHQ96KK5 128 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 RAD9AQ99638 391 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 HIST1H2AJQ99878 128 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 H2AFJQ9BTM1 129 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 DUSP26Q9BV47 211 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 CHST8Q9H2A9 424 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 SPG21Q9NZD8 308 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 BOLA1Q9Y3E2 137 aa13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 CFAP20Q9Y6A4 193 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-202ENST00000375692 NPIPB15A6NHN6 443 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 H3BQ06 376 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 H7C4K7 107 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 SOD2P04179 222 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 DEFA1P59665 94 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 DEFA3P59666 94 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 RACK1P63244 317 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 IRF3Q14653 427 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 RGNQ15493 299 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 COX20Q5RI15 118 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 ZNF648Q5T619 568 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 SLC8B1Q6J4K2 584 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 ZNF852Q6ZMS4 543 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 CCDC190Q86UF4 302 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 LGI4Q8N135 537 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 OR8J2Q8NGG1 315 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 GTPBP3Q969Y2 492 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 DMRTB1Q96MA1 342 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 SLC12A9Q9BXP2 914 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 RETREG1Q9H6L5 497 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 DDX28Q9NUL7 540 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 IMPAD1Q9NX62 359 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 TBC1D24Q9ULP9 559 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 DUSP12Q9UNI6 340 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 PADI2Q9Y2J8 665 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 OR51B4Q9Y5P0 310 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 PTPRSQ13332 1948 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 ANKRD34BA5PLL1 514 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 BNIP3LO60238 219 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 ETHE1O95571 254 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 KRT75O95678 551 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 MYOGP15173 224 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 CA8P35219 290 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 PIK3CBP42338 1070 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 NSG1P42857 185 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 HTR3AP46098 478 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 FBXO43Q4G163 708 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 ASB11Q8WXH4 323 aa13.57□□□□□ -0.24
CLCNKA-202ENST00000375692 PLD4Q96BZ4 506 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms