RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 PER3P56645 1201 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 OR4D2P58180 307 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 SKP1P63208 163 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 RBBP5Q15291 538 aaKnown RBP13.39□□□□□ -0.27
NELFE-201ENST00000375425 NIPAL1Q6NVV3 410 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 NXPE4Q6UWF7 544 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 CAPN12Q6ZSI9 719 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 TMPRSS11BQ86T26 416 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 FJX1Q86VR8 437 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 CEP97Q8IW35 865 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ZBED8Q8IZ13 594 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 BEST3Q8N1M1 668 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 TRPV3Q8NET8 790 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 DNAJB8Q8NHS0 232 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 EGFL8Q99944 293 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 AIF1LQ9BQI0 150 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 KLHL31Q9H511 634 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 GPAMQ9HCL2 828 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ABI3Q9P2A4 366 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 PYCARDQ9ULZ3 195 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 OARD1Q9Y530 152 aa13.39□□□□□ -0.27
NELFE-201ENST00000375425 ITPR2Q14571 2701 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 ZGRF1Q86YA3 2104 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 A0A1B0GUH1 482 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 FANCGO15287 622 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 ZG16O60844 167 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 B4GALT2O60909 372 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 CRYABP02511 175 aaKnown RBP13.38□□□□□ -0.27
NELFE-201ENST00000375425 JAK1P23458 1154 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 MST1P26927 711 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 DCTP40126 519 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 GDF5P43026 501 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 HNMTP50135 292 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 RAB8AP61006 207 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 CDKL1Q00532 357 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 REEP5Q00765 189 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 HYAL2Q12891 473 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 CBLBQ13191 982 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 TUBA3CQ13748 450 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 USP10Q14694 798 aaKnown RBP13.38□□□□□ -0.27
NELFE-201ENST00000375425 TSNQ15631 228 aaKnown RBP13.38□□□□□ -0.27
NELFE-201ENST00000375425 MEP1AQ16819 746 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 ZNF766Q5HY98 468 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 C1QL3Q5VWW1 255 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 TUBA3EQ6PEY2 450 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 GFRALQ6UXV0 394 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 CRLF3Q8IUI8 442 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 PYROXD1Q8WU10 500 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 VPS39Q96JC1 886 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 PTCHD1Q96NR3 888 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 NPAS2Q99743 824 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 MCMBPQ9BTE3 642 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 SLC6A16Q9GZN6 736 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 RHOJQ9H4E5 214 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 SMYD2Q9NRG4 433 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 ANKRD10Q9NXR5 420 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 NSMCE4AQ9NXX6 385 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 CTNNAL1Q9UBT7 734 aa13.38□□□□□ -0.27
NELFE-201ENST00000375425 URADA6NGE7 173 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 MAN1A2O60476 641 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 PRMT3O60678 531 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 WISP2O76076 250 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 UNC5CO95185 931 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 SMIM10L1P0DMW3 83 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 SSTR1P30872 391 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 CD96P40200 585 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 SLC26A5P58743 744 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 BTG2P78543 158 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 ZRSR2Q15696 482 aaKnown RBP13.37□□□□□ -0.27
NELFE-201ENST00000375425 C18orf21Q32NC0 220 aaPredicted RBP13.37□□□□□ -0.27
NELFE-201ENST00000375425 SPINK14Q6IE38 97 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 FRA10AC1Q70Z53 315 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 ADAMTSL2Q86TH1 951 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 SPATA6LQ8N4H0 392 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 BBOF1Q8ND07 529 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 CREB3L4Q8TEY5 395 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
NELFE-201ENST00000375425 RHBDF1Q96CC6 855 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 SMIM10Q96HG1 83 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 SIGLEC12Q96PQ1 595 aa13.37□□□□□ -0.27
NELFE-201ENST00000375425 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
NELFE-201ENST00000375425 UNKQ9C0B0 810 aaKnown RBP13.37□□□□□ -0.27
NELFE-201ENST00000375425 CLK4Q9HAZ1 481 aaKnown RBP13.37□□□□□ -0.27
NELFE-201ENST00000375425 MTO1Q9Y2Z2 717 aaKnown RBP13.37□□□□□ -0.27
NELFE-201ENST00000375425 DIDO1Q9BTC0 2240 aaKnown RBP13.36□□□□□ -0.27
NELFE-201ENST00000375425 NCF1BA6NI72 391 aaPredicted RBP13.36□□□□□ -0.27
NELFE-201ENST00000375425 NCF1CA8MVU1 366 aaPredicted RBP13.36□□□□□ -0.27
NELFE-201ENST00000375425 CXorf49A8MYA2 514 aaPredicted RBP13.36□□□□□ -0.27
NELFE-201ENST00000375425 FAM227AF5H4B4 570 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 NDC80O14777 642 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 WDR47O94967 919 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 SERPINA6P08185 405 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 C1GALT1C1LP0DN25 315 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 NCF1P14598 390 aaPredicted RBP13.36□□□□□ -0.27
NELFE-201ENST00000375425 GNAZP19086 355 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 SLC6A12P48065 614 aa13.36□□□□□ -0.27
NELFE-201ENST00000375425 SLC12A2P55011 1212 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms