RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 DAB2P98082 770 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 SPIBQ01892 262 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 SEMG2Q02383 582 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 CLPPQ16740 277 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 UGT8Q16880 541 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ZNF517Q6ZMY9 492 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 UBQLNLQ8IYU4 475 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 SH3KBP1Q96B97 665 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 SDHCQ99643 169 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 TTYH2Q9BSA4 534 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 CCM2Q9BSQ5 444 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 BBS2Q9BXC9 721 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ZFYVE1Q9HBF4 777 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 INSL5Q9Y5Q6 135 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 H3BQ06 376 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 CXCL14O95715 111 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 HMGA1P17096 107 aaKnown RBP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 AMD1P17707 334 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 RPS3P23396 243 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ATP5C1P36542 298 aaKnown RBP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 STARD3Q14849 445 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ARMC12Q5T9G4 340 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 CCDC190Q86UF4 302 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 GALNT12Q8IXK2 581 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 BHMTQ93088 406 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 MYO19Q96H55 970 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ZFYVE19Q96K21 471 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 NIPSNAP1Q9BPW8 284 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 IL26Q9NPH9 171 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 GKN1Q9NS71 199 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ZNF226Q9NYT6 803 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 DNMT3LQ9UJW3 386 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 TBC1D24Q9ULP9 559 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 NOTOA8MTQ0 251 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 GAPDHSO14556 408 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PRRG1O14668 218 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 SNX4O95219 450 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CLDN7O95471 211 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 ABCB1P08183 1280 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TNFSF8P32971 234 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PIK3CBP42338 1070 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 EPHB3P54753 998 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TAB1Q15750 504 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CHRNA6Q15825 494 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 IQCCQ4KMZ1 466 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 LILRA6Q6PI73 481 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CCDC149Q6ZUS6 474 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 UBE2R2Q712K3 238 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PGBD3Q8N328 593 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 B3GNT7Q8NFL0 401 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 SPPL3Q8TCT6 385 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 AUTS2Q8WXX7 1259 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TRNT1Q96Q11 434 aaKnown RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 MGLLQ99685 303 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TMEM246Q9BRR3 403 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 SLC6A14Q9UN76 642 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 A0A1W2PQ67 120 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PLK4O00444 970 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 LAMP1P11279 417 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 ACRV1P26436 265 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 DGKEP52429 567 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 SRSF11Q05519 484 aaKnown RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 HSPA14Q0VDF9 509 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PTCHD3Q3KNS1 767 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TBRG1Q3YBR2 411 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CYP27C1Q4G0S4 372 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 ZNF648Q5T619 568 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 RAB43Q86YS6 212 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 LGI4Q8N135 537 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 DEPDC4Q8N2C3 294 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 ST13P5Q8NFI4 369 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CSGALNACT1Q8TDX6 532 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CHAC2Q8WUX2 184 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TMCO6Q96DC7 493 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 SNX18Q96RF0 628 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CNPPD1Q9BV87 410 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 SLC22A14Q9Y267 594 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 GLYATL1P3A0A0U1RQE8 302 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 A0A1B0GVM2 712 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 YY2O15391 372 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 SLITRK5O94991 958 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CD160O95971 181 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CORO1AP31146 461 aaKnown RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 GKP32189 559 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CRYBA2P53672 197 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 WNT3P56703 355 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TIMM50Q3ZCQ8 353 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 C5orf22Q49AR2 442 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 FRG2Q64ET8 278 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 OR9Q2Q8NGE9 314 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 WDR36Q8NI36 951 aaKnown RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 GTPBP3Q969Y2 492 aaKnown RBP10.67□□□□□ -0.7
CCDC40-203ENST00000374877 FRG2BQ96QU4 278 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 OR2A14Q96R47 310 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 PHOX2BQ99453 314 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 COPS8Q99627 209 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 TCF25Q9BQ70 676 aa10.67□□□□□ -0.7
CCDC40-203ENST00000374877 CCDC32Q9BV29 185 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms