RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 PSMD7P51665 324 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 TARDBPQ13148 414 aaKnown RBP eCLIP13.04□□□□□ -0.326e-9■■■■■ 29.8
CLIC4-201ENST00000374379 PMS2P3Q13401 168 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 PRR23BQ6ZRT6 265 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 P2RY8Q86VZ1 359 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 HMGCLL1Q8TB92 370 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 ZBED6CLQ96FA7 236 aaPredicted RBP13.04□□□□□ -0.32
CLIC4-201ENST00000374379 SRMSQ9H3Y6 488 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 LTB4R2Q9NPC1 389 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 FADS2P1A8MWK0 482 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 IFNA16P05015 189 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CCNYL3P0C7X3 344 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 FPR1P21462 350 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CD9P21926 228 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 AVPR1BP47901 424 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 GSTM4Q03013 218 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 RGS1Q08116 209 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 SNAP47Q5SQN1 464 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 MCFD2Q8NI22 146 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 RERGQ96A58 199 aaPredicted RBP13.04□□□□□ -0.32
CLIC4-201ENST00000374379 SLC35G5Q96KT7 338 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CPEB1Q9BZB8 566 aaKnown RBP13.04□□□□□ -0.32
CLIC4-201ENST00000374379 FAM118AQ9NWS6 357 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 TVP23BQ9NYZ1 205 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 UTS2RQ9UKP6 389 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 MED16Q9Y2X0 877 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 A0A1W2PQU0 124 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CCNB2O95067 398 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 DCTP40126 519 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CENPAP49450 140 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 METAP1P53582 386 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 EIF4EBP2Q13542 120 aaPredicted RBP13.04□□□□□ -0.32
CLIC4-201ENST00000374379 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 C6orf141Q5SZD1 244 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 ANKRD34AQ69YU3 496 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CCDC116Q8IYX3 515 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 WDR48Q8TAF3 677 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 DNAAF2Q9NVR5 837 aaKnown RBP13.04□□□□□ -0.32
CLIC4-201ENST00000374379 SOHLH2Q9NX45 425 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 ERGIC3Q9Y282 383 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 ANK1P16157 1881 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 GMFGO60234 142 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CXCL10P02778 98 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 GRIA2P42262 883 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 GSTM5P46439 218 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 MXD1Q05195 221 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 SLC9A5Q14940 896 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 CLEC12AQ5QGZ9 265 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 DNAJB8Q8NHS0 232 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 ANKRD60Q9BZ19 345 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF232Q9UNY5 417 aa13.04□□□□□ -0.32
CLIC4-201ENST00000374379 LRRC72A6NJI9 287 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 M0R129 80 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 AP3D1O14617 1153 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 NME6O75414 186 aaPredicted RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 TSPAN19P0C672 248 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 NT5EP21589 574 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 CA5AP35218 305 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 RUNX3Q13761 415 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 BHLHB9Q6PI77 547 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 TAF8Q7Z7C8 310 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 ISG20Q96AZ6 181 aaKnown RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 IKZF5Q9H5V7 419 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 MARCH7Q9H992 704 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 MAT2BQ9NZL9 334 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 PCDHB11Q9Y5F2 797 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 LCTP09848 1927 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 GABRR3A8MPY1 467 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 PDE9AO76083 593 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 HNRNPA1P09651 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 CD47Q08722 323 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 GPNMBQ14956 572 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 RUNDC3AQ59EK9 446 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 ERI1Q8IV48 349 aaKnown RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 SPPL3Q8TCT6 385 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 NXPE3Q969Y0 559 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 HSFX1Q9UBD0 423 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 CACNA1CQ13936 2221 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF99A8MXY4 864 aaPredicted RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 CMPK1P30085 196 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 CCT3P49368 545 aaKnown RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 CCR3P51677 355 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 RGS21Q2M5E4 152 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 HNRNPA1L2Q32P51 320 aaKnown RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 KLHL12Q53G59 568 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 XKR7Q5GH72 579 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 TMEM150AQ86TG1 271 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 ZNF689Q96CS4 500 aaPredicted RBP13.03□□□□□ -0.32
CLIC4-201ENST00000374379 TAS2R9Q9NYW1 312 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 ERVK-18Q9QC07 812 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 TEKT2Q9UIF3 430 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 SARDHQ9UL12 918 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 SCN10AQ9Y5Y9 1956 aa13.03□□□□□ -0.32
CLIC4-201ENST00000374379 FZD6O60353 706 aa13.02□□□□□ -0.32
CLIC4-201ENST00000374379 APOL3O95236 402 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms