RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 LINC00615Q96LM1 132 aaPredicted RBP15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 SLC35A5Q9BS91 424 aa15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 DPEP2Q9H4A9 486 aa15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 XKR8Q9H6D3 395 aa15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 MOSPD1Q9UJG1 213 aa15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 BAG5Q9UL15 447 aa15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 GPR34Q9UPC5 381 aa15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 WDR37Q9Y2I8 494 aa15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 SAMHD1Q9Y3Z3 626 aaKnown RBP15.33■□□□□ 0.04
CNKSR1-202ENST00000374253 COL4A3Q01955 1670 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 H7BY64 318 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 XPNPEP2O43895 674 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 VEGFDO43915 354 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 MAN1A2O60476 641 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 ATE1O95260 518 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 FUCA1P04066 466 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 ACP5P13686 325 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 GDI1P31150 447 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 TIE1P35590 1138 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 MAPK9P45984 424 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 OR1E2P47887 323 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 AGBL4Q5VU57 503 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 YAF2Q8IY57 180 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 HDDC3Q8N4P3 179 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 GANCQ8TET4 914 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 FGF14Q92915 247 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 RAD51AP1Q96B01 352 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 PPCDCQ96CD2 204 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 COX14Q96I36 57 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 PRAP1Q96NZ9 151 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 F2RL3Q96RI0 385 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 BTNL2Q9UIR0 455 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 C3orf18Q9UK00 162 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 PRAMEF33A0A0G2JMD5 474 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 C17orf113A0A1B0GUU1 675 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 GCM2O75603 506 aaPredicted RBP15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 FURINP09958 794 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 CRHBPP24387 322 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 MAT2AP31153 395 aaKnown RBP15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 IL5RAQ01344 420 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 E2F2Q14209 437 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 CST6Q15828 149 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 PARM1Q6UWI2 310 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 CBLL1Q75N03 491 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 LRRTM4Q86VH4 590 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 CHST8Q9H2A9 424 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 FZD3Q9NPG1 666 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 SIRT5Q9NXA8 310 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 USE1Q9NZ43 259 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 KCNK6Q9Y257 313 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 SNX8Q9Y5X2 465 aa15.32■□□□□ 0.04
CNKSR1-202ENST00000374253 CCDC88CQ9P219 2028 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 NINQ8N4C6 2090 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 PI15O43692 258 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 TBX6O95947 436 aaPredicted RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 NR4A1P22736 598 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ALDH9A1P49189 494 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ERVK-21P61565 698 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 PCDH1Q08174 1060 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 DYNC1I2Q13409 638 aaKnown RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 FGL2Q14314 439 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 C6orf141Q5SZD1 244 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ANXA8L1Q5VT79 327 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 GALNT18Q6P9A2 607 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 SHQ1Q6PI26 577 aaKnown RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 RNF130Q86XS8 419 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 HIPK1Q86Z02 1210 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 CPA6Q8N4T0 437 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ANKRD53Q8N9V6 530 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 SPPL2AQ8TCT8 520 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 MYADMQ96S97 322 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 SH3GL3Q99963 347 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 HDAC8Q9BY41 377 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 CCDC90BQ9GZT6 254 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 RPS6KA6Q9UK32 745 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 PNMA8BQ9ULN7 279 aaPredicted RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ORC6Q9Y5N6 252 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 FOXE1O00358 373 aaPredicted RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 BCKDKO14874 412 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 SERPIND1P05546 499 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 HTR1AP08908 422 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 MATN1P21941 496 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 FMO3P31513 532 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 MVDP53602 400 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 RPS26P62854 115 aaKnown RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 C2orf27AQ580R0 203 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 KIAA1211LQ6NV74 962 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ZNF773Q6PK81 442 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 EIF3MQ7L2H7 374 aaKnown RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ADCK2Q7Z695 626 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ZNF513Q8N8E2 541 aaPredicted RBP15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 OR52J3Q8NH60 311 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 ADAMTS16Q8TE57 1224 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 UBE2FQ969M7 185 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 MACROD1Q9BQ69 325 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 RHNO1Q9BSD3 238 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 DGCR6LQ9BY27 220 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 SLC6A16Q9GZN6 736 aa15.31■□□□□ 0.04
CNKSR1-202ENST00000374253 HEATR5BQ9P2D3 2071 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms