RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 OR10Q1Q8NGQ4 319 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 STON2Q8WXE9 905 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 LDAHQ9H6V9 325 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 ZCCHC3Q9NUD5 404 aaKnown RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 CARD8Q9Y2G2 431 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PCDHGA11Q9Y5H2 935 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 AKAP12Q02952 1782 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 HEPACAM2A8MVW5 462 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 H3BQ06 376 aaPredicted RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 IL33O95760 270 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 C8orf89P0DMQ9 161 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PNLIPRP1P54315 467 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PRRT3Q5FWE3 981 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 FBXO46Q6PJ61 603 aaPredicted RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 TPRG1Q6ZUI0 275 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 OXR1Q8N573 874 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 C17orf50Q8WW18 174 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 EBF4Q9BQW3 602 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 DCSTAMPQ9H295 470 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 MTMR10Q9NXD2 777 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 NEMP2A6NFY4 417 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PAK4O96013 591 aaPredicted RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 KLK1P06870 262 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 YES1P07947 543 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 HMGCS1Q01581 520 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 ANKDD1AQ495B1 522 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 C14orf80Q86SX3 495 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 LRRC57Q8N9N7 239 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 NFKBIDQ8NI38 313 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 KLHDC7BQ96G42 594 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 IL21RQ9HBE5 538 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF358Q9NW07 568 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 SH2B3Q9UQQ2 575 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 MYOCOSA0A1B0GUC4 107 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PI15O43692 258 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 NPHS1O60500 1241 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PREPP48147 710 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 GNG2P59768 71 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 HERV-K104P61576 105 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PRAMEF14Q5SWL7 426 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PRAMEF13Q5VWM6 474 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 FIP1L1Q6UN15 594 aaKnown RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 SMG8Q8ND04 991 aaKnown RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 OR8K3Q8NH51 312 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 SFXN1Q9H9B4 322 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 EBF2Q9HAK2 575 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 P2RX2Q9UBL9 471 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PCDHGB1Q9Y5G3 927 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 LAMTOR5O43504 91 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 BRAT1Q6PJG6 821 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ZSCAN4Q8NAM6 433 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 PLA2G15Q8NCC3 412 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 GALNT6Q8NCL4 622 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SMARCD2Q92925 531 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ITPAQ9BY32 194 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 RNF38Q9H0F5 515 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 CNTN6Q9UQ52 1028 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SLC22A14Q9Y267 594 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 LEFTY1O75610 366 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 PIGRP01833 764 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 FESP07332 822 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 POLR2CP19387 275 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 AAK1Q2M2I8 961 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 TMEM44Q2T9K0 475 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 LACTB2Q53H82 288 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 HAGHLQ6PII5 290 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF662Q6ZS27 426 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SLC29A4Q7RTT9 530 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 TBC1D15Q8TC07 691 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 KCTD13Q8WZ19 329 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ATPIF1Q9UII2 106 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SOX14O95416 240 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF865P0CJ78 1059 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 CDH1P12830 882 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 PAMR1Q6UXH9 720 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 IGSF9Q9P2J2 1179 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ISPDA4D126 451 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 BLOC1S5-TXNDC5H3BN57 136 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SCDO00767 359 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 CLEC3AO75596 197 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SIX3O95343 332 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 IFNA2P01563 188 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 ID2Q02363 134 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SOX4Q06945 474 aaPredicted RBP13.86□□□□□ -0.19
TRAF1-201ENST00000373887 OR52E4Q8NGH9 312 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SLC35F5Q8WV83 523 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 FCRL5Q96RD9 977 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 B3GAT2Q9NPZ5 323 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 C14orf105Q9NVL8 296 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 CMAHPQ9Y471 501 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 H0YGN5 161 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 M0R129 80 aa13.86□□□□□ -0.19
TRAF1-201ENST00000373887 SLC22A1O15245 554 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms