RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TMCO6Q96DC7 493 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 MTERF1Q99551 399 aaKnown RBP14.25□□□□□ -0.13
COL9A2-202ENST00000372748 RAD9AQ99638 391 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 CCDC32Q9BV29 185 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 BARHL1Q9BZE3 327 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 NUFIP1Q9UHK0 495 aaKnown RBP14.25□□□□□ -0.13
COL9A2-202ENST00000372748 KLK4Q9Y5K2 254 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 HLA-EP13747 358 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 PRPS1L1P21108 318 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 GALK2Q01415 458 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 MTAPQ13126 283 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 CHRNA6Q15825 494 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 PTCHD3Q3KNS1 767 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 MLIPQ5VWP3 458 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 RNF165Q6ZSG1 346 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 NAGSQ8N159 534 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 ST13P5Q8NFI4 369 aaPredicted RBP14.25□□□□□ -0.13
COL9A2-202ENST00000372748 ASPNQ9BXN1 380 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 ATG10Q9H0Y0 220 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 PLXNA4Q9HCM2 1894 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 TRPV5Q9NQA5 729 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 SNTG1Q9NSN8 517 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 A0A1W2PQ09 198 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 SMAD6O43541 496 aaKnown RBP14.24□□□□□ -0.13
COL9A2-202ENST00000372748 GCM2O75603 506 aaPredicted RBP14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CKMT1AP12532 417 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 HMGA1P17096 107 aaKnown RBP14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ITGALP20701 1170 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 POU1F1P28069 291 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 MAPK1P28482 360 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CA8P35219 290 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 DDOSTP39656 456 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 HNF4AP41235 474 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 MXD1Q05195 221 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 HSPA14Q0VDF9 509 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 LYPD8Q6UX82 237 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CADM2Q8N3J6 435 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 DOHHQ9BU89 302 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 RERGLQ9H628 205 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ZFYVE1Q9HBF4 777 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 DYRK4Q9NR20 520 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 TRPM5Q9NZQ8 1165 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 MAU2Q9Y6X3 613 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 PLK4O00444 970 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CSF2P04141 144 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 FHP07954 510 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ACRV1P26436 265 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CSKP41240 450 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CD83Q01151 205 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 GAB1Q13480 694 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 GPNMBQ14956 572 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ZNF79Q15937 498 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ARMC12Q5T9G4 340 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ZNF438Q7Z4V0 828 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 TRIM48Q8IWZ4 208 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ASB15Q8WXK1 588 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 SLC22A12Q96S37 553 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 STARD7Q9NQZ5 370 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ABCB8Q9NUT2 735 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 V9GYH0 126 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 KCNE1BA0A087WTH5 132 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 WWP2O00308 870 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 ALX3O95076 343 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 RPS3P23396 243 aaKnown RBP eCLIP14.24□□□□□ -0.134e-6■□□□□ 11.1
COL9A2-202ENST00000372748 TIE1P35590 1138 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 GANABQ14697 944 aaKnown RBP14.24□□□□□ -0.13
COL9A2-202ENST00000372748 FRG2Q64ET8 278 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 UBE2R2Q712K3 238 aaPredicted RBP14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CHST9Q7L1S5 443 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 BBS7Q8IWZ6 715 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 PLD4Q96BZ4 506 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 FRG2BQ96QU4 278 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 HHIPQ96QV1 700 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 IL4I1Q96RQ9 567 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 RHCGQ9UBD6 479 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 CRNNQ9UBG3 495 aaPredicted RBP14.24□□□□□ -0.13
COL9A2-202ENST00000372748 PCDHB11Q9Y5F2 797 aa14.24□□□□□ -0.13
COL9A2-202ENST00000372748 PCDH17O14917 1159 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 IL7P13232 177 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 CRATP43155 626 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 SREBF2Q12772 1141 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 VEZF1Q14119 521 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 PTGES3Q15185 160 aaKnown RBP14.23□□□□□ -0.13
COL9A2-202ENST00000372748 TMPRSS11AQ6ZMR5 421 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 ZNF367Q7RTV3 350 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 DENND6BQ8NEG7 585 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 UBASH3BQ8TF42 649 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 COQ8BQ96D53 544 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 MYO19Q96H55 970 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 PADI2Q9Y2J8 665 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 PDE4DIPQ5VU43 2346 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 A0A1W2PQ45 241 aaPredicted RBP14.23□□□□□ -0.13
COL9A2-202ENST00000372748 A0A1W2PQY0 241 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 PRAMEF25A6NGN4 478 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 ADAMDEC1O15204 470 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 BNIP3LO60238 219 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 FZD6O60353 706 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 TRBC1P01850 177 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 BPIP17213 487 aa14.23□□□□□ -0.13
COL9A2-202ENST00000372748 SRSF11Q05519 484 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms