RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 NR4A3Q92570 626 aa13.64□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZNF486Q96H40 463 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-202ENST00000372190 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
RAPGEF1-202ENST00000372190 KCNS2Q9ULS6 477 aa13.64□□□□□ -0.23
RAPGEF1-202ENST00000372190 CTBP1Q13363 440 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 GK2Q14410 553 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SEC23BQ15437 767 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 CAPN13Q6MZZ7 669 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 C2orf73Q8N5S3 287 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 CYB5D2Q8WUJ1 264 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 MITD1Q8WV92 249 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 TFAP2BQ92481 460 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 COQ8BQ96D53 544 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 FAIMQ9NVQ4 179 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SPATA6Q9NWH7 488 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 PCDHB1Q9Y5F3 818 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 PCDHGC4Q9Y5F7 938 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 PCDHGB2Q9Y5G2 931 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 TUBAL3A6NHL2 446 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 FMO3P31513 532 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 IDO2Q6ZQW0 420 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 MMAAQ8IVH4 418 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ANKLE1Q8NAG6 615 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 GPR156Q8NFN8 814 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 MGAT4CQ9UBM8 478 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 FZD10Q9ULW2 581 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 C20orf202A1L168 122 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 CSF2P04141 144 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 HAPLN1P10915 354 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 HOXB2P14652 356 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 MPSTP25325 297 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ATP6V0D1P61421 351 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 HTD2P86397 168 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ALG1LQ6GMV1 187 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ELP2Q6IA86 826 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 C12orf45Q8N5I9 185 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 NMUR1Q9HB89 426 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ACAD8Q9UKU7 415 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 HERVK_113P63132 956 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 GPR17Q13304 367 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SPIN3Q5JUX0 258 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SYVN1Q86TM6 617 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 LMLNQ96KR4 655 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 TMEM109Q9BVC6 243 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 MCOLN1Q9GZU1 580 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZNF780BQ9Y6R6 833 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 TEX13CA0A0J9YWL9 993 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 H7C1Q1 480 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 H7C417 338 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 APOA2P02652 100 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 CHATP28329 748 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 RBMXP38159 391 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ITPRIPL2Q3MIP1 535 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZNF311Q5JNZ3 666 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SLC30A6Q6NXT4 461 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 CMC1Q7Z7K0 106 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SNX29P2Q8IUI4 249 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZBTB2Q8N680 514 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 OR7G1Q8NGA0 311 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 RPLP0P6Q8NHW5 317 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 CASTOR1Q8WTX7 329 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 TMEM27Q9HBJ8 222 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 ASF1BQ9NVP2 202 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 SEC14L3Q9UDX4 400 aa13.63□□□□□ -0.23
RAPGEF1-202ENST00000372190 EDDM13A0A1B0GTR0 161 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 OR2AG2A6NM03 316 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 H3BNH8 94 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 VNN1O95497 513 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 MAP2K3P46734 347 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 RAB7AP51149 207 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 DGKQP52824 942 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 LRRC37A5PQ49AS3 106 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ARSIQ5FYB1 569 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ANKRD13BQ86YJ7 626 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 SLC7A5P1Q8MH63 180 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 PYROXD2Q8N2H3 581 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 FAM109AQ8N4B1 249 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 PSMG2Q969U7 264 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 BTBD1Q9H0C5 482 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZNF175Q9Y473 711 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 NUP188Q5SRE5 1749 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 MATN3O15232 486 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 GRID2O43424 1007 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ATP6AP2O75787 350 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CMPK1P30085 196 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 GNPDA1P46926 289 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ADGRF1Q5T601 910 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 TANGO2Q6ICL3 276 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 NUS1Q96E22 293 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 BARD1Q99728 777 aaKnown RBP13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 ZNF416Q9BWM5 594 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 EBF2Q9HAK2 575 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 LGALS13Q9UHV8 139 aa13.62□□□□□ -0.23
RAPGEF1-202ENST00000372190 CYP11A1P05108 521 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms