RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 USP29Q9HBJ7 922 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 IL1RAPQ9NPH3 570 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 ALKBH4Q9NXW9 302 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 ATP6V1G2-DDX39BF2Z307 99 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SOCS7O14512 581 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 RPL10P27635 214 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 IRF9Q00978 393 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 MVKQ03426 396 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 BNIP3Q12983 259 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLBPQ14493 270 aaKnown RBP eCLIP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 NPTX1Q15818 432 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 OXR1Q8N573 874 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 ENDOVQ8N8Q3 282 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 MAPK15Q8TD08 544 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 SNX33Q8WV41 574 aa12.91□□□□□ -0.34
RAPGEF1-201ENST00000372189 MYH1P12882 1939 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 CHD4Q14839 1912 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 NME6O75414 186 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 CD247P20963 164 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 BDKRB1P46663 353 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 ERVK-8P63133 956 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 RUNX3Q13761 415 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 ELOCQ15369 112 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 DHCR24Q15392 516 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC30A8Q8IWU4 369 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 CLIP4Q8N3C7 705 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 RPL36Q9Y3U8 105 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF891A8MT65 544 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 ARPC2O15144 300 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PRODHO43272 600 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 SOCS5O75159 536 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 BEST1O76090 585 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 KAT7O95251 611 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 LATS1O95835 1130 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 SRPRAP08240 638 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PSKH1P11801 424 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 IMPDH1P20839 514 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 RPS14P62263 151 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 EIF5AP63241 154 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 FAM83HQ6ZRV2 1179 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 OR5T3Q8NGG3 340 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 TAPBPLQ9BX59 468 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 B4GALT6Q9UBX8 382 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 KLF15Q9UIH9 416 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 A0A0J9YVX5 310 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 HAS3O00219 553 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PLD2O14939 933 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 MTHFD1P11586 935 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PVALBP20472 110 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 OXTRP30559 389 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 CCKBRP32239 447 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 HERVK_113P63132 956 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 MOGQ16653 247 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 FAM174BQ3ZCQ3 159 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 IQCCQ4KMZ1 466 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 AKR1C8PQ5T2L2 129 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 KBTBD6Q86V97 674 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 COMMD1Q8N668 190 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 DENND1AQ8TEH3 1009 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 RIT1Q92963 219 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 ERVK-6Q9BXR3 956 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PCDHB16Q9NRJ7 776 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PPP4R1LQ9P1A2 415 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 IKZF2Q9UKS7 526 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 OAZ3Q9UMX2 235 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 ANXA8P13928 327 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 HNF1BP35680 557 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 NFKB2Q00653 900 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 MADCAM1Q13477 382 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 NCSTNQ92542 709 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 LRIG1Q96JA1 1093 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 EFCAB11Q9BUY7 163 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC2A11Q9BYW1 496 aa12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 PTBP2Q9UKA9 531 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-201ENST00000372189 MBLAC1A4D2B0 266 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 SAP18O00422 153 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ACOX3O15254 700 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 GRID2O43424 1007 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 CKMT2P17540 419 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 GKP32189 559 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 KHKP50053 298 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 DUSP3P51452 185 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 DSTNP60981 165 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ANKRD46Q86W74 232 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 NUDT13Q86X67 352 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TSEN15Q8WW01 171 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 SMPDL3AQ92484 453 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TFGQ92734 400 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 RGMAQ96B86 450 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 LRRC58Q96CX6 371 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZBED6CLQ96FA7 236 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 MTERF1Q99551 399 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 HSBP1L1C9JCN9 74 aa12.89□□□□□ -0.35
RAPGEF1-201ENST00000372189 MID1O15344 667 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms