RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 COQ10AQ96MF6 247 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 PRSS16Q9NQE7 514 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 SPATA6Q9NWH7 488 aaPredicted RBP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 THUMPD1Q9NXG2 353 aaKnown RBP11.28□□□□□ -0.6
PDE6C-201ENST00000371447 ERVK-18Q9QC07 812 aa11.28□□□□□ -0.6
PDE6C-201ENST00000371447 FGF19O95750 216 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 ANGPTL1O95841 491 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.6
PDE6C-201ENST00000371447 DAPP51397 102 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 RAD23AP54725 363 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 PPP2R2BQ00005 443 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 ELP6Q0PNE2 266 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 TP53BP2Q13625 1128 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 RGNQ15493 299 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 SLC5A12Q1EHB4 618 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 PRSS53Q2L4Q9 553 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 ANKDD1AQ495B1 522 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 GGTA1PQ4G0N0 100 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 LRIF1Q5T3J3 769 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 VITQ6UXI7 678 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 GOLM1Q8NBJ4 401 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 CHDHQ8NE62 594 aaPredicted RBP11.27□□□□□ -0.6
PDE6C-201ENST00000371447 MIPOL1Q8TD10 442 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 NCSTNQ92542 709 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 PPP1R16AQ96I34 528 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 C12orf66Q96MD2 445 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 CCDC115Q96NT0 180 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 SIRT5Q9NXA8 310 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 PCDHB11Q9Y5F2 797 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 CKAP5Q14008 2032 aa11.27□□□□□ -0.6
PDE6C-201ENST00000371447 H3BMQ9 156 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ERAL1O75616 437 aaKnown RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 BMP10O95393 424 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 HNRNPA1P09651 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 PTNP21246 168 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ITGB7P26010 798 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 GJA4P35212 333 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 MAGEA10P43363 369 aaPredicted RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 GZMMP51124 257 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 DCDC1P59894 354 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 WSCD2Q2TBF2 565 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 BROXQ5VW32 411 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 AHSA2Q719I0 299 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 DGLUCYQ7Z3D6 616 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 PIWIL3Q7Z3Z3 882 aaKnown RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 FRMD1Q8N878 549 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 TTC29Q8NA56 475 aaPredicted RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 OR56A3Q8NH54 315 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 VANGL1Q8TAA9 524 aaPredicted RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ZFAND2BQ8WV99 257 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 OTUB2Q96DC9 234 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 COG8Q96MW5 612 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ARPC5LQ9BPX5 153 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 CENPOQ9BU64 300 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ZDHHC5Q9C0B5 715 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 TMEM184CQ9NVA4 438 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 EXO1Q9UQ84 846 aaKnown RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 WDR37Q9Y2I8 494 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 TANC1Q9C0D5 1861 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 SRPRAP08240 638 aaKnown RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 C8orf89P0DMQ9 161 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 MAGEA8P43361 318 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 MRPL19P49406 292 aaKnown RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 SPIBQ01892 262 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ZNF763Q0D2J5 394 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 CSTF3Q12996 717 aaKnown RBP11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ZNF540Q8NDQ6 660 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 PBX4Q9BYU1 374 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 ANKRA2Q9H9E1 313 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3DA0A087WVF3 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3IA0A087WXS9 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3EA0A087X179 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3KA0A087X1G2 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 A0A1W2PRB8 838 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3FA6NER0 549 aaPredicted RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3LB9A6J9 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 H0YIV9 168 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 RETP07949 1114 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 SLC35G4P0C7Q5 338 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3HP0C7X1 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 CRHBPP24387 322 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 PDGFRLQ15198 375 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3GQ6DHY5 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3CQ6IPX1 549 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 NXPE4Q6UWF7 544 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 PRR23BQ6ZRT6 265 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 C17orf64Q86WR6 236 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 CALHM3Q86XJ0 350 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 ETFBKMTQ8IXQ9 262 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 TBC1D3Q8IZP1 549 aaPredicted RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 AMER3Q8N944 861 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 ZNF557Q8N988 423 aaPredicted RBP11.26□□□□□ -0.61
PDE6C-201ENST00000371447 PIK3C3Q8NEB9 887 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 FLCNQ8NFG4 579 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 C16orf78Q8WTQ4 265 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 SLC6A16Q9GZN6 736 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 DMRT3Q9NQL9 472 aa11.26□□□□□ -0.61
PDE6C-201ENST00000371447 C1QTNF3-AMACRE9PGA6 284 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms