RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 XPR1Q9UBH6 696 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 GIMAP2Q9UG22 337 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SLC17A4Q9Y2C5 497 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ANKRD12Q6UB98 2062 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PLXND1Q9Y4D7 1925 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 A0A087X0M5 115 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 A0A1B0GX30 115 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 A0A1W2PR48 441 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 A0A1W2PR77 199 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 MGAT4DA6NG13 374 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CLCA1A8K7I4 914 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 TCP11X1B4DZS4 312 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PRAMEF26H0Y7S4 382 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 UBXN8O00124 270 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 BIRC5O15392 142 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ITM2AO43736 263 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 MAGEC1O60732 1142 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SHOX2O60902 331 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 MATN4O95460 622 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ABHD16AO95870 558 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 WNT1P04628 370 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 RBP1P09455 135 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 DGKAP23743 735 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 AKT2P31751 481 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CCR10P46092 362 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 KIAA1024LP59773 190 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ATP6V0D1P61421 351 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ARHGAP8P85298 464 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 IL9RQ01113 521 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CSTF1Q05048 431 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 ABRQ12979 859 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SRSF5Q13243 272 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 BOP1Q14137 746 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 NFE2L1Q14494 772 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 NFATC4Q14934 902 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PDK4Q16654 411 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PHKG1Q16816 387 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PPP1R3AQ16821 1122 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 MST1LQ2TV78 715 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 C18orf21Q32NC0 220 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 USP39Q53GS9 565 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 PYCR3Q53H96 274 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SBSNQ6UWP8 590 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ZCCHC23Q6ZST2 131 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 RNF44Q7L0R7 432 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 TAX1BP1Q86VP1 789 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 WDR5BQ86VZ2 330 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 TRAPPC5Q8IUR0 188 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 NUDCD3Q8IVD9 361 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 GLB1L2Q8IW92 636 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CFAP206Q8IYR0 622 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 LRRC34Q8IZ02 419 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 BCL6BQ8N143 479 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 NKAIN3Q8N8D7 197 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CADM4Q8NFZ8 388 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 OR2L2Q8NH16 312 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PPP1R14CQ8TAE6 165 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 RHEBL1Q8TAI7 183 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 STON2Q8WXE9 905 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CFHR4Q92496 578 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ZUFSPQ96AP4 578 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ZNF514Q96K75 400 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 MAGEB18Q96M61 343 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 GATA5Q9BWX5 397 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 C20orf27Q9GZN8 174 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 RABEP2Q9H5N1 569 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CCDC134Q9H6E4 229 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 IRAK4Q9NWZ3 460 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 COPG2Q9UBF2 871 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 LPAR3Q9UBY5 353 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ZNHIT2Q9UHR6 403 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 EIF2B4Q9UI10 523 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 SUFUQ9UMX1 484 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 C17orf113A0A1B0GUU1 675 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 KRT87PA6NCN2 255 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 A8MT66 165 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 GFYI3L273 518 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CACNB4O00305 520 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 QSOX1O00391 747 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 KMOO15229 486 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 KLK8O60259 260 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 KERAO60938 352 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LY86O95711 162 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 APOA4P06727 396 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 MPC1LP0DKB6 136 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CBSLP0DN79 551 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 MYL2P10916 166 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ENO3P13929 434 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 DRD4P21917 467 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ATP5F1P24539 256 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 CD27P26842 260 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ACADLP28330 430 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CBSP35520 551 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 GNPDA1P46926 289 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RGS4P49798 205 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CASP6P55212 293 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 YPEL5P62699 121 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 BST1Q10588 318 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 EIF2B5Q13144 721 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms