RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 RLIMQ9NVW2 624 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 NDUFAF4Q9P032 175 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 PCDHGB3Q9Y5G1 929 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 TIMP1P01033 207 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 LCKP06239 509 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 MVDP53602 400 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 NCS1P62166 190 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 SELENOWP63302 87 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 DHCR24Q15392 516 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 KIAA0907Q7Z7F0 614 aaPredicted RBP17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 SNX29P2Q8IUI4 249 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 ENTHD1Q8IYW4 607 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 MMP21Q8N119 569 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 MRPL43Q8N983 215 aaKnown RBP17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 RPL3LQ92901 407 aaKnown RBP17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 IL17FQ96PD4 163 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 ACAT2Q9BWD1 397 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 PRDM8Q9NQV8 689 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 HSPE1-MOB4S4R3N1 261 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 TNFRSF11BO00300 401 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 SOD1P00441 154 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 KLK1P06870 262 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 DGKGP49619 791 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 CXCR4P61073 352 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 ZNF763Q0D2J5 394 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 RAET1GQ6H3X3 334 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 DNASE1L2Q92874 299 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 FAM83CQ9BQN1 747 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 SORBS1Q9BX66 1292 aaKnown RBP17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 ACOT13Q9NPJ3 140 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 ZNF282Q9UDV7 671 aaPredicted RBP17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 RNASET2O00584 256 aaKnown RBP17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 DNAJB5O75953 348 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 GABARAPO95166 117 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 ACVR2AP27037 513 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 PRIM2P49643 509 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 TAS2R50P59544 299 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 OCA2Q04671 838 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 MPEG1Q2M385 716 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 CPA6Q8N4T0 437 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 NFKBIDQ8NI38 313 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 APH1BQ8WW43 257 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 METTL2AQ96IZ6 378 aaKnown RBP17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 PLAGL1Q9UM63 463 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 DYRK1BQ9Y463 629 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 PCDHGA6Q9Y5G7 932 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 EPCAMP16422 314 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 ZNF12P17014 697 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 FUT4P22083 530 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 EPHA5P54756 1037 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 PRSS53Q2L4Q9 553 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 TMEM236Q5W0B7 351 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 CAMKMTQ7Z624 323 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 P2RY8Q86VZ1 359 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 NLRP8Q86W28 1048 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 SLC5A8Q8N695 610 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 ARMC7Q9H6L4 198 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 DKK3Q9UBP4 350 aa17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 PNMA8BQ9ULN7 279 aaPredicted RBP17.37■□□□□ 0.37
UBQLN4-201ENST00000368309 PCM1Q15154 2024 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 NOTCH4Q99466 2003 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 PIPSLA2A3N6 862 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 MMP20O60882 483 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 NADKO95544 446 aaPredicted RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 C1GALT1C1LP0DN25 315 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 PPIBP23284 216 aaKnown RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 C21orf33P30042 268 aaPredicted RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 PCGF2P35227 344 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 ST13P50502 369 aaKnown RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 TAP2Q03519 686 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 FPGSQ05932 587 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 ZNF557Q8N988 423 aaPredicted RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 YIPF6Q96EC8 236 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 DTD2Q96FN9 168 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 EPYCQ99645 322 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 SELENONQ9NZV5 590 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 NFKBIL1Q9UBC1 381 aaPredicted RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 CORO2BQ9UQ03 480 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 LYVE1Q9Y5Y7 322 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 GOLGA4Q13439 2230 aaKnown RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 BOLA2-SMG1P6H3BVE0 249 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 FUCA1P04066 466 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 GPR1P46091 355 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 CDH12P55289 794 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 ST8SIA6P61647 398 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 NFE2L1Q14494 772 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 PROX2Q3B8N5 592 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 SYT6Q5T7P8 510 aaPredicted RBP17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 RNF130Q86XS8 419 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 DMRT3Q9NQL9 472 aa17.36■□□□□ 0.37
UBQLN4-201ENST00000368309 PRAMEF25A6NGN4 478 aa17.35■□□□□ 0.37
UBQLN4-201ENST00000368309 J3KTA2 159 aa17.35■□□□□ 0.37
UBQLN4-201ENST00000368309 SPINT1O43278 529 aa17.35■□□□□ 0.37
UBQLN4-201ENST00000368309 POU2F1P14859 743 aa17.35■□□□□ 0.37
UBQLN4-201ENST00000368309 CCR3P51677 355 aa17.35■□□□□ 0.37
UBQLN4-201ENST00000368309 MVKQ03426 396 aa17.35■□□□□ 0.37
UBQLN4-201ENST00000368309 SYT16Q17RD7 645 aa17.35■□□□□ 0.37
UBQLN4-201ENST00000368309 SLC5A12Q1EHB4 618 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms