RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 UNQ6494/PRO21346Q6UXR6 183 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 VN1R5Q7Z5H4 357 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 CUZD1Q86UP6 607 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 GBP7Q8N8V2 638 aaPredicted RBP13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 SLC38A9Q8NBW4 561 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 OR2L5Q8NG80 312 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 SMIM10Q96HG1 83 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 CCT7Q99832 543 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 EFHD1Q9BUP0 239 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 REXO4Q9GZR2 422 aaKnown RBP13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 ANKHQ9HCJ1 492 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 LHX9Q9NQ69 397 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 STARD5Q9NSY2 213 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 MDC1Q14676 2089 aaKnown RBP13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
NSMCE1-201ENST00000361439 SEC16AO15027 2179 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 A0A1B0GTL3 188 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 WDR91A4D1P6 747 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 MANBAO00462 879 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 RAD1O60671 282 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 CRCPO75575 148 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 TBX6O95947 436 aaPredicted RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 CHEK2O96017 543 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 SERPIND1P05546 499 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 ALAS2P22557 587 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 ABCE1P61221 599 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 CYP4F2P78329 520 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 CSTF3Q12996 717 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 STX3Q13277 289 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 DSG2Q14126 1118 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 NKAIN1Q4KMZ8 207 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 DEPDC1Q5TB30 811 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 KHDRBS2Q5VWX1 349 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 TRIM40Q6P9F5 258 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 ZCCHC23Q6ZST2 131 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 ZFAND4Q86XD8 727 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 CLYBLQ8N0X4 340 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 KCT2Q8NC54 265 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 GALNT6Q8NCL4 622 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 MGARPQ8TDB4 240 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 UTP15Q8TED0 518 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 SELENOMQ8WWX9 145 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 CCT6BQ92526 530 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 FKBP10Q96AY3 582 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 MS4A6EQ96DS6 147 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 MOCOSQ96EN8 888 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 METTL2AQ96IZ6 378 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 KCNC2Q96PR1 638 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 MTERF1Q99551 399 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 TBCDQ9BTW9 1192 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 GPR87Q9BY21 358 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 SLC26A1Q9H2B4 701 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 MANSC1Q9H8J5 431 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 ACSS2Q9NR19 701 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 INTS9Q9NV88 658 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 THAP1Q9NVV9 213 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 DHCR7Q9UBM7 475 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 HAO1Q9UJM8 370 aa13.14□□□□□ -0.31
NSMCE1-201ENST00000361439 MAGEB17A8MXT2 336 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 C9J4A7 227 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 AZIN1O14977 448 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 FOXS1O43638 330 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 HSPA4LO95757 839 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 CHN1P15882 459 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 BGNP21810 368 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 IL10P22301 178 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 STAT5AP42229 794 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 SLC1A6P48664 564 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 KANK2Q63ZY3 851 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 ABHD17CQ6PCB6 329 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 TIPARPQ7Z3E1 657 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 TRIM46Q7Z4K8 759 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 CACNA2D3Q8IZS8 1091 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 MDM1Q8TC05 714 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 NKD1Q969G9 470 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 RGMAQ96B86 450 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 FAR2Q96K12 515 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 NPLQ9BXD5 320 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 ILKAPQ9H0C8 392 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 WDR54Q9H977 334 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 ZNF304Q9HCX3 659 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 MLXIPLQ9NP71 852 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 PFDN4Q9NQP4 134 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 NDOR1Q9UHB4 597 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 KCND3Q9UK17 655 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 MAP4K5Q9Y4K4 846 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 SPTBP11277 2137 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 ASPMQ8IZT6 3477 aa13.13□□□□□ -0.31
NSMCE1-201ENST00000361439 IGLV3-12A0A075B6K2 115 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 NPIPB8E9PQR5 432 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 FFAR3O14843 346 aa13.12□□□□□ -0.31
NSMCE1-201ENST00000361439 GPR42O15529 346 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms