RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CPSF4LA6NMK7 179 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 H6PDO95479 791 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 C8BP07358 591 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 HEXBP07686 556 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 BPIP17213 487 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 XRCC1P18887 633 aaPredicted RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 CST9Q5W186 159 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 PLET1Q6UQ28 207 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 PLXDC1Q8IUK5 500 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 SLC22A15Q8IZD6 547 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 KLHL36Q8N4N3 616 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 NFKBIDQ8NI38 313 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 RAB2BQ8WUD1 216 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 TMEM234Q8WY98 164 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 DAZLQ92904 295 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 UCK2Q9BZX2 261 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 METTL7AQ9H8H3 244 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 TCF7L1Q9HCS4 588 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 TRPV5Q9NQA5 729 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 PLAGL1Q9UM63 463 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 C6orf47O95873 294 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 RPLP0P05388 317 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 EPCAMP16422 314 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 RAB28P51157 221 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 PJA1Q8NG27 643 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 OR6K6Q8NGW6 343 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 CNDP2Q96KP4 475 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 NLGN3Q9NZ94 848 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 DNMT3AQ9Y6K1 912 aaPredicted RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 SOBPA7XYQ1 873 aa13□□□□□ -0.33
LDB3-202ENST00000361373 GPR89AB7ZAQ6 455 aa13□□□□□ -0.33
LDB3-202ENST00000361373 BTN3A3O00478 584 aa13□□□□□ -0.33
LDB3-202ENST00000361373 CPNE3O75131 537 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 GPR89BP0CG08 455 aa13□□□□□ -0.33
LDB3-202ENST00000361373 HNRNPA2B1P22626 353 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 CSNK1DP48730 415 aa13□□□□□ -0.33
LDB3-202ENST00000361373 POU6F2P78424 691 aaPredicted RBP13□□□□□ -0.33
LDB3-202ENST00000361373 IL18R1Q13478 541 aa13□□□□□ -0.33
LDB3-202ENST00000361373 GANABQ14697 944 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 LASP1Q14847 261 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 NANOGNBQ7Z5D8 188 aa13□□□□□ -0.33
LDB3-202ENST00000361373 THRSPQ92748 146 aa13□□□□□ -0.33
LDB3-202ENST00000361373 MMABQ96EY8 250 aaPredicted RBP13□□□□□ -0.33
LDB3-202ENST00000361373 CD180Q99467 661 aa13□□□□□ -0.33
LDB3-202ENST00000361373 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 KLHL31Q9H511 634 aa13□□□□□ -0.33
LDB3-202ENST00000361373 TM9SF3Q9HD45 589 aa13□□□□□ -0.33
LDB3-202ENST00000361373 MARK1Q9P0L2 795 aa13□□□□□ -0.33
LDB3-202ENST00000361373 USP3Q9Y6I4 520 aa13□□□□□ -0.33
LDB3-202ENST00000361373 K7ERQ8 282 aa13□□□□□ -0.33
LDB3-202ENST00000361373 CBFA2T3O75081 653 aa13□□□□□ -0.33
LDB3-202ENST00000361373 BCAS2O75934 225 aaPredicted RBP13□□□□□ -0.33
LDB3-202ENST00000361373 GALNT1Q10472 559 aaPredicted RBP13□□□□□ -0.33
LDB3-202ENST00000361373 TCEAL6Q6IPX3 200 aa13□□□□□ -0.33
LDB3-202ENST00000361373 BTN2A1Q7KYR7 527 aa13□□□□□ -0.33
LDB3-202ENST00000361373 ZNF598Q86UK7 904 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 KLHDC9Q8NEP7 349 aa13□□□□□ -0.33
LDB3-202ENST00000361373 SLC25A36Q96CQ1 311 aa13□□□□□ -0.33
LDB3-202ENST00000361373 NCDNQ9UBB6 729 aa13□□□□□ -0.33
LDB3-202ENST00000361373 PCDHGB5Q9Y5G0 923 aa13□□□□□ -0.33
LDB3-202ENST00000361373 HYKKA2RU49 373 aa13□□□□□ -0.33
LDB3-202ENST00000361373 TLR4O00206 839 aa13□□□□□ -0.33
LDB3-202ENST00000361373 TP73O15350 636 aa13□□□□□ -0.33
LDB3-202ENST00000361373 NOBOXO60393 691 aa13□□□□□ -0.33
LDB3-202ENST00000361373 FOSL2P15408 326 aa13□□□□□ -0.33
LDB3-202ENST00000361373 ZNF252P-AS1Q0IIN9 211 aa13□□□□□ -0.33
LDB3-202ENST00000361373 HNRNPA1L2Q32P51 320 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 CRTC1Q6UUV9 634 aa13□□□□□ -0.33
LDB3-202ENST00000361373 NXPE4Q6UWF7 544 aa13□□□□□ -0.33
LDB3-202ENST00000361373 ARHGAP22Q7Z5H3 698 aa13□□□□□ -0.33
LDB3-202ENST00000361373 PIGKQ92643 395 aa13□□□□□ -0.33
LDB3-202ENST00000361373 C11orf24Q96F05 449 aaPredicted RBP13□□□□□ -0.33
LDB3-202ENST00000361373 DIRAS2Q96HU8 199 aa13□□□□□ -0.33
LDB3-202ENST00000361373 CLCC1Q96S66 551 aa13□□□□□ -0.33
LDB3-202ENST00000361373 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
LDB3-202ENST00000361373 OR6C74A6NCV1 312 aa13□□□□□ -0.33
LDB3-202ENST00000361373 ANXA2P2A6NMY6 339 aa13□□□□□ -0.33
LDB3-202ENST00000361373 WASHC1A8K0Z3 465 aa13□□□□□ -0.33
LDB3-202ENST00000361373 WASH3PC4AMC7 463 aa13□□□□□ -0.33
LDB3-202ENST00000361373 PCDHGA12O60330 932 aa13□□□□□ -0.33
LDB3-202ENST00000361373 ANXA2P07355 339 aaKnown RBP13□□□□□ -0.33
LDB3-202ENST00000361373 ITGB7P26010 798 aa13□□□□□ -0.33
LDB3-202ENST00000361373 TBPL1P62380 186 aa13□□□□□ -0.33
LDB3-202ENST00000361373 SMCO1Q147U7 214 aa13□□□□□ -0.33
LDB3-202ENST00000361373 TRAM2Q15035 370 aa13□□□□□ -0.33
LDB3-202ENST00000361373 RAB41Q5JT25 222 aa13□□□□□ -0.33
LDB3-202ENST00000361373 TCTE1Q5JU00 501 aa13□□□□□ -0.33
LDB3-202ENST00000361373 OR52E8Q6IFG1 317 aa13□□□□□ -0.33
LDB3-202ENST00000361373 WASH2PQ6VEQ5 465 aa13□□□□□ -0.33
LDB3-202ENST00000361373 GPR150Q8NGU9 434 aa13□□□□□ -0.33
LDB3-202ENST00000361373 PHOSPHO1Q8TCT1 267 aa13□□□□□ -0.33
LDB3-202ENST00000361373 CHCHD6Q9BRQ6 235 aa13□□□□□ -0.33
LDB3-202ENST00000361373 KLHL42Q9P2K6 505 aa13□□□□□ -0.33
LDB3-202ENST00000361373 PADI2Q9Y2J8 665 aa13□□□□□ -0.33
LDB3-202ENST00000361373 MYH11P35749 1972 aa12.99□□□□□ -0.33
LDB3-202ENST00000361373 FAM170BA6NMN3 283 aa12.99□□□□□ -0.33
LDB3-202ENST00000361373 MID1O15344 667 aa12.99□□□□□ -0.33
LDB3-202ENST00000361373 PENKP01210 267 aaPredicted RBP12.99□□□□□ -0.33
LDB3-202ENST00000361373 AGTR2P50052 363 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms