RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 FUZQ9BT04 418 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SPATA9Q9BWV2 254 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 FOLH1BQ9HBA9 442 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SPG21Q9NZD8 308 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 DAPL1A0PJW8 107 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 ICMTO60725 284 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 FAM214AQ32MH5 1076 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 POM121L1PQ3SYA9 428 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 PSAPL1Q6NUJ1 521 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 ARL9Q6T311 187 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 CHCHD4Q8N4Q1 142 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SRFBP1Q8NEF9 429 aaKnown RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 NEIL3Q8TAT5 605 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 RFT1Q96AA3 541 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 FAM25EA8MYX2 175 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 PDYNP01213 254 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SMPD1P17405 629 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SOX4Q06945 474 aaPredicted RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 OR4K1Q8NGD4 311 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 DNAJA4Q8WW22 397 aaPredicted RBP15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SLC9A6Q92581 669 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 CD93Q9NPY3 652 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 SRRDQ9UH36 339 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 N6AMT1Q9Y5N5 214 aa15.44■□□□□ 0.06
CLSTN1-201ENST00000361311 UBFD1O14562 309 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 HOXA2O43364 376 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 CDK1P06493 297 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 FHP07954 510 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 SRPRAP08240 638 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 RPL4P36578 427 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 KCNC4Q03721 635 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 EIF4HQ15056 248 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 C18orf21Q32NC0 220 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 SMARCD3Q6STE5 483 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 FAM220AQ7Z4H9 259 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 SLC43A3Q8NBI5 491 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 FAM110BQ8TC76 370 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 GPR151Q8TDV0 419 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 TIFAQ96CG3 184 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 ATOH8Q96SQ7 321 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 OR51V1Q9H2C8 321 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 MTIF3Q9H2K0 278 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 TNKS2Q9H2K2 1166 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 NUP50Q9UKX7 468 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 MGAT4BQ9UQ53 548 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 BCHEP06276 602 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 DGKGP49619 791 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 AP2S1P53680 142 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 CDH11P55287 796 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 CHRNA6Q15825 494 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 GPR142Q7Z601 462 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 C17orf64Q86WR6 236 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 C2orf73Q8N5S3 287 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 OR8J1Q8NGP2 316 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 POLE3Q9NRF9 147 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 INIPQ9NRY2 104 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 CD84Q9UIB8 345 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 DNMT3AQ9Y6K1 912 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 SAGP10523 405 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 SYT6Q5T7P8 510 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 GTF2H4Q92759 462 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 ZNF583Q96ND8 569 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 INPP5KQ9BT40 448 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 HCN3Q9P1Z3 774 aa15.43■□□□□ 0.06
CLSTN1-201ENST00000361311 UPK3BL1B0FP48 263 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 UPK3BL2E5RIL1 263 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 SLC9A3R1O14745 358 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 PSMD8P48556 350 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 PNLIPRP1P54315 467 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 PPP2R2BQ00005 443 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 CCSAPQ6IQ19 270 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 GDPGP1Q6ZNW5 385 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 GPR149Q86SP6 731 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 GJD3Q8N144 294 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 OR6C4Q8NGE1 309 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 TNFRSF10DQ9UBN6 386 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 OR14I1A6ND48 311 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 SEPT4O43236 478 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 AP1S2P56377 157 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 SCRN3Q0VDG4 424 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 CDK10Q15131 360 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 HSD17B12Q53GQ0 312 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 PGBD2Q6P3X8 592 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 CEACAM20Q6UY09 585 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 TOR1AIP2Q8NFQ8 470 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 HEBP1Q9NRV9 189 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 PCDHB11Q9Y5F2 797 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 SH3D21A4FU49 640 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 LYRM1O43325 122 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 PRMT3O60678 531 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 CH25HO95992 272 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 TGFB1P01137 390 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 IFNGP01579 166 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 CAPNS1P04632 268 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 ZNF806P0C7X5 589 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 HRH2P25021 359 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 GHRHRQ02643 423 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 GINS1Q14691 196 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 NCEH1Q6PIU2 408 aa15.42■□□□□ 0.06
CLSTN1-201ENST00000361311 SCRN2Q96FV2 425 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms