RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 EFCAB3Q8N7B9 438 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 GTF2H4Q92759 462 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 GFM2Q969S9 779 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 THAP11Q96EK4 314 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 ANKRD27Q96NW4 1050 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 ELF4Q99607 663 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SLC39A3Q9BRY0 314 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 ZNF717Q9BY31 904 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 RMND5AQ9H871 391 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 MYNNQ9NPC7 610 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 WBP11Q9Y2W2 641 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 L3MBTL1Q9Y468 752 aa20.04■□□□□ 0.8
MAP1LC3A-201ENST00000360668 C15orf38-AP3S2A0A0A6YYH1 394 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 TRIM38O00635 465 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 KLHL18O94889 574 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 KCNH1O95259 989 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SERPIND1P05546 499 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 COX7A2P14406 83 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 HOXB3P14651 431 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 KIR3DL1P43629 444 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 ARRB1P49407 418 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SLC7A2P52569 658 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 AP2B1P63010 937 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 PHC1P78364 1004 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SLC34A1Q06495 639 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 BIRC2Q13490 618 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 PGS1Q32NB8 556 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 PEAR1Q5VY43 1037 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 FCRL6Q6DN72 434 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 IKBIPQ70UQ0 350 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 ARPINQ7Z6K5 226 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 GPR180Q86V85 440 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 OR8J2Q8NGG1 315 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CDC26Q8NHZ8 85 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 C16orf78Q8WTQ4 265 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 PRPF18Q99633 342 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 REXO4Q9GZR2 422 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 POMT2Q9UKY4 750 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 MAN2B2Q9Y2E5 1009 aa20.03■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CAPN5O15484 640 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SORBS2O94875 1100 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 UBXN7O94888 489 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SLC6A2P23975 617 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 TPP2P29144 1249 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 RPL3P39023 403 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 GSTM5P46439 218 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 HNRNPFP52597 415 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CAPRIN1Q14444 709 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CCDC6Q16204 474 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 C6orf132Q5T0Z8 1188 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CCNYL2Q5T2Q4 361 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 FBXO42Q6P3S6 717 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 NUDT13Q86X67 352 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 BAHD1Q8TBE0 780 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 RSC1A1Q92681 617 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CCDC124Q96CT7 223 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 ITCHQ96J02 903 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SLC38A3Q99624 504 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 IRF2BPLQ9H1B7 796 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 SLAMF8Q9P0V8 285 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CD300AQ9UGN4 299 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 ATP6V1HQ9UI12 483 aa20.02■□□□□ 0.8
MAP1LC3A-201ENST00000360668 CACNA1EQ15878 2313 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 KRT36O76013 467 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 GBAP04062 536 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 TYRP1P17643 537 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 LSSP48449 732 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 CYP4F3Q08477 520 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 HYAL2Q12891 473 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 RCN1Q15293 331 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 ZNF528Q3MIS6 628 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 FAM71E1Q6IPT2 247 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 CEP68Q76N32 757 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 R3HCC1LQ7Z5L2 792 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 UBE3DQ7Z6J8 389 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 SLC15A3Q8IY34 581 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 TMEM132CQ8N3T6 1108 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 OR7A2PQ8NGA2 310 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 SORBS1Q9BX66 1292 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 AICDAQ9GZX7 198 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 REEP4Q9H6H4 257 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 LHX9Q9NQ69 397 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 EVA1BQ9NVM1 165 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 FAM120CQ9NX05 1096 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 PILRAQ9UKJ1 303 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 PACSIN3Q9UKS6 424 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 ANGPTL2Q9UKU9 493 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 PCDHA9Q9Y5H5 950 aa20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 MDC1Q14676 2089 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3A-201ENST00000360668 ARHGAP10A1A4S6 786 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 ANP32DO95626 131 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 HOXD12P35452 270 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 TAS2R50P59544 299 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 STXBP1P61764 594 aaKnown RBP20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 TRAP1Q12931 704 aaKnown RBP20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 BNIP3Q12983 259 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 ANGPT1Q15389 498 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 SHBQ15464 509 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 CPTPQ5TA50 214 aa20■□□□□ 0.79
MAP1LC3A-201ENST00000360668 OR4C11Q6IEV9 310 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms