RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PTRH2Q9Y3E5 179 aaKnown RBP18.21■□□□□ 0.51
HLA-DRB1-201ENST00000360004 NAALAD2Q9Y3Q0 740 aa18.21■□□□□ 0.51
HLA-DRB1-201ENST00000360004 ACTL7BQ9Y614 415 aa18.21■□□□□ 0.51
HLA-DRB1-201ENST00000360004 MRPS18BQ9Y676 258 aaKnown RBP18.21■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SLC22A7Q9Y694 548 aa18.21■□□□□ 0.51
HLA-DRB1-201ENST00000360004 SPTBP11277 2137 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ERI3O43414 337 aaKnown RBP18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TRIM13O60858 407 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SH3BGRLO75368 114 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 KLHL18O94889 574 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MED26O95402 600 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 NSA2O95478 260 aaKnown RBP18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PRKAR1AP10644 381 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 HMOX2P30519 316 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 DNAJB13P59910 316 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 RPS18P62269 152 aaKnown RBP18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PCDH1Q08174 1060 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 VAC14Q08AM6 782 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 LCP2Q13094 533 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 DSG2Q14126 1118 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SGO1Q5FBB7 561 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MFSD4BQ5TF39 518 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 CHSY3Q70JA7 882 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 OVCH1Q7RTY7 1134 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 LAS2Q8IYD9 372 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 L3MBTL4Q8NA19 623 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 CREB3L4Q8TEY5 395 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 GAL3ST3Q96A11 431 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 CMTM7Q96FZ5 175 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SLC45A3Q96JT2 553 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MTERF1Q99551 399 aaKnown RBP18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PAIP2Q9BPZ3 127 aaKnown RBP18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 FAM117AQ9C073 453 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SLC6A16Q9GZN6 736 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 REXO4Q9GZR2 422 aaKnown RBP18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 RHBGQ9H310 441 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TMBIM4Q9HC24 238 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ZBTB26Q9HCK0 441 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 HCN3Q9P1Z3 774 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 NXT1Q9UKK6 140 aaKnown RBP18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SNX6Q9UNH7 406 aa18.2■□□□□ 0.5
HLA-DRB1-201ENST00000360004 CDC14CA4D256 554 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ZNF860A6NHJ4 632 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 H0YIG0 161 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 H0YIV9 168 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SGK494L7N484 410 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 RDH16O75452 317 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 CREG1O75629 220 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 OR4F21O95013 312 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ZWINTO95229 277 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 F8A1P23610 371 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PLA2G16P53816 162 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MAGOHP61326 146 aaKnown RBP18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TRAF3Q13114 568 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ERV3-1Q14264 604 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PCLAFQ15004 111 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ZNF517Q6ZMY9 492 aaPredicted RBP18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SYVN1Q86TM6 617 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PRSS58Q8IYP2 241 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ANKRD42Q8N9B4 389 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SRFBP1Q8NEF9 429 aaKnown RBP18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 UTP15Q8TED0 518 aaKnown RBP18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MIEF2Q96C03 454 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MTFMTQ96DP5 389 aaKnown RBP18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ZNF382Q96SR6 550 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MID1IP1Q9NPA3 183 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TRPS1Q9UHF7 1281 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TCFL5Q9UL49 500 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PCDHGA6Q9Y5G7 932 aa18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MDC1Q14676 2089 aaKnown RBP18.19■□□□□ 0.5
HLA-DRB1-201ENST00000360004 A0A0G2JN53 185 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TM9SF1O15321 606 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 FOXS1O43638 330 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TYROBPO43914 113 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 TGFB1P01137 390 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 KRT6AP02538 564 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ALBP02768 609 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 KRT6BP04259 564 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ITGAXP20702 1163 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ALDH3A1P30838 453 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PIK3CBP42338 1070 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 KRT6CP48668 564 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PKNOX1P55347 436 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 BTN3A2P78410 334 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MAT1AQ00266 395 aaKnown RBP18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 E2F2Q14209 437 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 HHATQ5VTY9 493 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ADNP2Q6IQ32 1131 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 PRSS41Q7RTY9 318 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 RAB43Q86YS6 212 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 NUDCD3Q8IVD9 361 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 CDYL2Q8N8U2 506 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 HUS1BQ8NHY5 278 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 METTL6Q8TCB7 284 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 ZNF473Q8WTR7 871 aaKnown RBP18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 F2RL3Q96RI0 385 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 KLHL31Q9H511 634 aa18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 SOX17Q9H6I2 414 aaPredicted RBP18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 MKKSQ9NPJ1 570 aaPredicted RBP18.18■□□□□ 0.5
HLA-DRB1-201ENST00000360004 NKIRAS1Q9NYS0 192 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms