RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ENTPD1P49961 510 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 SAMD12Q8N8I0 201 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 PSKH2Q96QS6 385 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ASPNQ9BXN1 380 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 LRRN3Q9H3W5 708 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 B8ZZF3 427 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 TNFRSF10BO14763 440 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ARL6IP5O75915 188 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 TUBA3CQ13748 450 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 RABL3Q5HYI8 236 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ATAD3CQ5T2N8 411 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 LYSMD3Q7Z3D4 306 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 METTL27Q8N6F8 245 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 VGLL2Q8N8G2 317 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 OR4K17Q8NGC6 315 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 CPNE2Q96FN4 548 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 FAM163AQ96GL9 167 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 TSNAXQ99598 290 aaKnown RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF225Q9UK10 706 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 GLOD5A6NK44 160 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 C11orf98E9PRG8 122 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 M0R2N6 131 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 FOXD2O60548 495 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SLITRK5O94991 958 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 S100PP25815 95 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 LILRA4P59901 499 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 LAS2Q8IYD9 372 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 NAT8LQ8N9F0 302 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 TMIEQ8NEW7 156 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SSX3Q99909 188 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 NPLQ9BXD5 320 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 NOCTQ9UK39 431 aaKnown RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 PCDHGB2Q9Y5G2 931 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 AGLP35573 1532 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SPARCP09486 303 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 PTPN2P17706 415 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 ARL2P36404 184 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 MAGEA3P43357 314 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 UBE2UQ5VVX9 321 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 C3orf33Q6P1S2 294 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SLC39A4Q6P5W5 647 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 PHOX2BQ99453 314 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 MAPKAP1Q9BPZ7 522 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 CASRP41180 1078 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SNU13P55769 128 aaKnown RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 LIPKQ5VXJ0 399 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 FRG2Q64ET8 278 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 MMAAQ8IVH4 418 aaKnown RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 NINJ1Q92982 152 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SH3YL1Q96HL8 342 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 FRG2BQ96QU4 278 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SCP2D1Q9UJQ7 156 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 AJAP1Q9UKB5 411 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 FLT3LGP49771 235 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 RPS24P62847 133 aaKnown RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 GAD2Q05329 585 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 HNRNPDQ14103 355 aaKnown RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 CHRFAM7AQ494W8 412 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 C2orf27AQ580R0 203 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 ADGRD2Q7Z7M1 963 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 NLGN2Q8NFZ4 835 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 ISOC1Q96CN7 298 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 DPCDQ9BVM2 203 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 WDR26Q9H7D7 661 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 ZDHHC3Q9NYG2 299 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 LRRC42Q9Y546 428 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 H0YGN5 161 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 WNT9AO14904 365 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 FKTNO75072 461 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 UBXN2BQ14CS0 331 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 MOGQ16653 247 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 ASTE1Q2TB18 679 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 Q8N9G6 341 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 OR6N2Q8NGY6 317 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF675Q8TD23 568 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SLC25A44Q96H78 314 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 CCM2Q9BSQ5 444 aa15.54■□□□□ 0.08
COL18A1-203ENST00000359759 SOX17Q9H6I2 414 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-203ENST00000359759 A0A0A6YYH2 397 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 A6NJ64 397 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 CLCNKAP51800 687 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 ST3GAL3Q11203 375 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 SYPL2Q5VXT5 272 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 CARD17Q5XLA6 110 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 NCBP2-AS2Q69YL0 99 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 GDPD4Q6W3E5 623 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 GPAT4Q86UL3 456 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 FAM46DQ8NEK8 389 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 FBXO22Q8NEZ5 403 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 CMTM7Q96FZ5 175 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 METTL7AQ9H8H3 244 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 COQ3Q9NZJ6 369 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 ABCB7O75027 752 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 ALPPL2P10696 532 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 GRPRP30550 384 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 TTLQ8NG68 377 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 SUN3Q8TAQ9 357 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 RIT1Q92963 219 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 KLHL15Q96M94 604 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 J3KR12 359 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms