RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.2■□□□□ 0.02
PHTF1-201ENST00000357783 C16orf78Q8WTQ4 265 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 PPCDCQ96CD2 204 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 NODALQ96S42 347 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 SLC35A5Q9BS91 424 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 SORBS1Q9BX66 1292 aaKnown RBP15.2■□□□□ 0.02
PHTF1-201ENST00000357783 TRIT1Q9H3H1 467 aaKnown RBP15.2■□□□□ 0.02
PHTF1-201ENST00000357783 ADPRHL2Q9NX46 363 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 RWDD3Q9Y3V2 267 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 FURINP09958 794 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 CCNA2P20248 432 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 EPHA2P29317 976 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 GALK1P51570 392 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 TMBIM6P55061 237 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 KCNJ10P78508 379 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 PRAMEF14Q5SWL7 426 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 PRAMEF13Q5VWM6 474 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 C11orf96Q7Z7L8 435 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 ZBTB46Q86UZ6 589 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 SETD9Q8NE22 299 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 CXorf40BQ96DE9 158 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 MAGED4Q96JG8 741 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 LINC00615Q96LM1 132 aaPredicted RBP15.2■□□□□ 0.02
PHTF1-201ENST00000357783 ASB16Q96NS5 453 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 TMEM121BQ9BXQ6 578 aaPredicted RBP15.2■□□□□ 0.02
PHTF1-201ENST00000357783 TMEM245Q9H330 911 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 DPEP2Q9H4A9 486 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 KRT84Q9NSB2 600 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 GPATCH2Q9NW75 528 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 SIRT5Q9NXA8 310 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 GMPPBQ9Y5P6 360 aa15.2■□□□□ 0.02
PHTF1-201ENST00000357783 hCG_2014768A0A024R1R8 64 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 TBC1D3BA6NDS4 549 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 GCM2O75603 506 aaPredicted RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 ZNF182P17025 639 aaPredicted RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 TNFRSF1BP20333 461 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 P2RY2P41231 377 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 CCR3P51677 355 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 NFATC3Q12968 1075 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 TUBA3CQ13748 450 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 ZC3H7AQ8IWR0 971 aaKnown RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 TTC29Q8NA56 475 aaPredicted RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 OR5AK3PQ8NH89 298 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 SPPL2AQ8TCT8 520 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 FBLIM1Q8WUP2 373 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 SUSD6Q92537 303 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 C7orf34Q96L11 122 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 OR52A5Q9H2C5 316 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 EHD1Q9H4M9 534 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 RUBCNLQ9H714 662 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 ATAD3AQ9NVI7 634 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 CHCHD3Q9NX63 227 aaKnown RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 CFAP20Q9Y6A4 193 aaKnown RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 PLXND1Q9Y4D7 1925 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 TRPM6Q9BX84 2022 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 C17orf113A0A1B0GUU1 675 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 C5orf67F2Z3F1 127 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 KLHL18O94889 574 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 PCCBP05166 539 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 IL12RB1P42701 662 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 MVDP53602 400 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 CNTN1Q12860 1018 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 BNIP3Q12983 259 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 EIF4HQ15056 248 aaKnown RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 MPEG1Q2M385 716 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 TMEM52BQ4KMG9 183 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 IQCCQ4KMZ1 466 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 PIWIL3Q7Z3Z3 882 aaKnown RBP15.19■□□□□ 0.02
PHTF1-201ENST00000357783 B3GNT8Q7Z7M8 397 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 MMP21Q8N119 569 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 DPP7Q9UHL4 492 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 GPR34Q9UPC5 381 aa15.19■□□□□ 0.02
PHTF1-201ENST00000357783 TMEM229AB2RXF0 380 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 VEGFDO43915 354 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 INMTO95050 263 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 EPHX1P07099 455 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 CCDC159P0C7I6 412 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 NR4A1P22736 598 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 PRSS53Q2L4Q9 553 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 LAIR1Q6GTX8 287 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 HEATR4Q86WZ0 1026 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 HERVK_113Q902F9 699 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 SMARCD2Q92925 531 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 MUL1Q969V5 352 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 DOHHQ9BU89 302 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 SLC23A2Q9UGH3 650 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 ZNF451Q9Y4E5 1061 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 DGKBQ9Y6T7 804 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 DOCK9Q9BZ29 2069 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 TRIM64BA6NI03 449 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 PI15O43692 258 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 MAN1A2O60476 641 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 JRKO75564 520 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 C9P02748 559 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 RRM2P31350 389 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 KEAP1Q14145 624 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 TEAD4Q15561 434 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 GCNT6Q5T4J0 391 aa15.18■□□□□ 0.02
PHTF1-201ENST00000357783 C10orf62Q5T681 223 aaPredicted RBP15.18■□□□□ 0.02
PHTF1-201ENST00000357783 FAM71E1Q6IPT2 247 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms