RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 COX18Q8N8Q8 333 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 FAM163AQ96GL9 167 aaPredicted RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 TTYH2Q9BSA4 534 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ICKQ9UPZ9 632 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 BRWD1Q9NSI6 2320 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ISM1B1AKI9 464 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MATN3O15232 486 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ADAP00813 363 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CDK1P06493 297 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 NFYBP25208 207 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CALCRP30988 508 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SLC1A3P43003 542 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ART1P52961 327 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MFSD13AQ14CX5 517 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ARRDC4Q8NCT1 418 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 NDNFQ8TB73 568 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 DNASE1L2Q92874 299 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ELP4Q96EB1 424 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LIN37Q96GY3 246 aaPredicted RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 KLHL9Q9P2J3 617 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 HK3P52790 923 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 GRIK4Q16099 956 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 BLOC1S3Q6QNY0 202 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LACC1Q8IV20 430 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LGALS12Q96DT0 336 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 B3GNT4Q9C0J1 378 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 COQ10BQ9H8M1 238 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SPON1Q9HCB6 807 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 EGFL7Q9UHF1 273 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 A0A096LPI6 279 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 C9IYK1 514 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 YBX3P16989 372 aaKnown RBP eCLIP7.79□□□□□ -1.162e-6■■■□□ 18.7
HTT-201ENST00000355072 ADORA2AP29274 412 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 RPIAP49247 311 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LYRM7Q5U5X0 104 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ZNF425Q6IV72 752 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 DOK6Q6PKX4 331 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CEP68Q76N32 757 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 PIAS4Q8N2W9 510 aaPredicted RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 MTURNQ8N3F0 131 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SYT15Q9BQS2 421 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ASPNQ9BXN1 380 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MFSD1Q9H3U5 465 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 RAB40ALP0C0E4 278 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SSBP1Q04837 148 aaKnown RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 MELKQ14680 651 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SLC16A9Q7RTY1 509 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 OR10H4Q8NGA5 316 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 RAB40AQ8WXH6 277 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MROQ9BYG7 248 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 BHLHE40O14503 412 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SULT1C4O75897 302 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 IFNGR1P15260 489 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CMPK1P30085 196 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SUOXP51687 545 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MCCD1P59942 119 aaPredicted RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 EMX2Q04743 252 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ZACNQ401N2 412 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 ARL9Q6T311 187 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LINGO4Q6UY18 593 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 OR2T11Q8NH01 316 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 C22orf15Q8WYQ4 148 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SMAD5Q99717 465 aaKnown RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 RPF2Q9H7B2 306 aaKnown RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 TLE6Q9H808 572 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 C11orf16Q9NQ32 467 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SYN3O14994 580 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CDC25CP30307 473 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 USP49Q70CQ1 688 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 OR5T1Q8NG75 326 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 TMBIM1Q969X1 311 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 UPRTQ96BW1 309 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 SLC25A31Q9H0C2 315 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 OSGEPL1Q9H4B0 414 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 DBNDD1Q9H9R9 158 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LCHNA4D1U4 455 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 LY86O95711 162 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 IL1AP01583 271 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 HNRNPLP14866 589 aaKnown RBP eCLIP7.79□□□□□ -1.164e-8■■■■■ 30
HTT-201ENST00000355072 RARRES1P49788 294 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CCR8P51685 355 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CNTN2Q02246 1040 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MZT1Q08AG7 82 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 VASH1Q7L8A9 365 aaPredicted RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 SIAH1Q8IUQ4 282 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 CEP97Q8IW35 865 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 PRPS1P60891 318 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 TGFBIQ15582 683 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 MAP1SQ66K74 1059 aaPredicted RBP7.79□□□□□ -1.16
HTT-201ENST00000355072 SYT14Q8NB59 555 aa7.79□□□□□ -1.16
HTT-201ENST00000355072 FUBP3Q96I24 572 aaKnown RBP eCLIP7.79□□□□□ -1.16
HTT-201ENST00000355072 BCL9LQ86UU0 1499 aa7.78□□□□□ -1.16
HTT-201ENST00000355072 TRAV19A0A0A6YYK7 116 aa7.78□□□□□ -1.16
HTT-201ENST00000355072 GLYATL1P3A0A0U1RQE8 302 aa7.78□□□□□ -1.16
HTT-201ENST00000355072 UNC119BA6NIH7 251 aa7.78□□□□□ -1.16
HTT-201ENST00000355072 CSTBP04080 98 aaKnown RBP7.78□□□□□ -1.16
HTT-201ENST00000355072 IL12BP29460 328 aa7.78□□□□□ -1.16
HTT-201ENST00000355072 PEA15Q15121 130 aa7.78□□□□□ -1.16
HTT-201ENST00000355072 TOMM20Q15388 145 aa7.78□□□□□ -1.16
HTT-201ENST00000355072 RNF212Q495C1 297 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms