RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PAOXQ6QHF9 649 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 WDR53Q7Z5U6 358 aaPredicted RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 SDCCAG8Q86SQ7 713 aaPredicted RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 LDB1Q86U70 411 aaPredicted RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 PLD3Q8IV08 490 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 C16orf52Q8NHV5 167 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 FOPNLQ96NB1 174 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 TTYH2Q9BSA4 534 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 KIFC1Q9BW19 673 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 DMRT3Q9NQL9 472 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 ABCF3Q9NUQ8 709 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 UTP6Q9NYH9 597 aaKnown RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 MARCH4Q9P2E8 410 aaPredicted RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 MRFAP1Q9Y605 127 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 A0A0G2JNJ9 132 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 SGK494L7N484 410 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 CDK2AP1O14519 115 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 GLI4P10075 376 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 TPSB2P20231 275 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 RPS3P23396 243 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX55-202ENST00000354291 NMBRP28336 390 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 CCNFP41002 786 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 TPSAB1Q15661 275 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 ARMC3Q5W041 872 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 MRNIPQ6NTE8 343 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 OTOAQ7RTW8 1153 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 MAGEC3Q8TD91 643 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 ELP5Q8TE02 316 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 RBCK1Q9BYM8 510 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 P2RY12Q9H244 342 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 TRIM45Q9H8W5 580 aaPredicted RBP14.83□□□□□ -0.04
DDX55-202ENST00000354291 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 Q9UFV3 132 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 PHF3Q92576 2039 aaKnown RBP14.83□□□□□ -0.04
DDX55-202ENST00000354291 MPDZO75970 2070 aa14.83□□□□□ -0.04
DDX55-202ENST00000354291 NSA2O95478 260 aaKnown RBP14.82□□□□□ -0.04
DDX55-202ENST00000354291 EZRP15311 586 aaKnown RBP14.82□□□□□ -0.04
DDX55-202ENST00000354291 IL1RNP18510 177 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 CXCR5P32302 372 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 MLF1P58340 268 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 NKX6-1P78426 367 aaPredicted RBP14.82□□□□□ -0.04
DDX55-202ENST00000354291 B3GNT6Q6ZMB0 384 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 CYP4X1Q8N118 509 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 OTUD6BQ8N6M0 293 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 SMPDL3AQ92484 453 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 TSLPQ969D9 159 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 TCF12Q99081 682 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 MACROD1Q9BQ69 325 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 SPATA7Q9P0W8 599 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 TAC3Q9UHF0 121 aa14.82□□□□□ -0.04
DDX55-202ENST00000354291 ZANQ9Y493 2812 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 ARHGEF33A8MVX0 844 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 FCHO1O14526 889 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 HAT1O14929 419 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 SLC16A5O15375 505 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 VAPBO95292 243 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 MGAT1P26572 445 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 TRHRP34981 398 aaPredicted RBP14.81□□□□□ -0.04
DDX55-202ENST00000354291 ADH7P40394 386 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 BCL6P41182 706 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 EIF3BP55884 814 aaKnown RBP14.81□□□□□ -0.04
DDX55-202ENST00000354291 PPIAP62937 165 aaKnown RBP14.81□□□□□ -0.04
DDX55-202ENST00000354291 RHAGQ02094 409 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 PRDX1Q06830 199 aaKnown RBP14.81□□□□□ -0.04
DDX55-202ENST00000354291 SLC25A35Q3KQZ1 300 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 RNF187Q5TA31 235 aaPredicted RBP14.81□□□□□ -0.04
DDX55-202ENST00000354291 ICE2Q659A1 982 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 ZNF425Q6IV72 752 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 PRELID2Q8N945 189 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 ZFP62Q8NB50 900 aaPredicted RBP14.81□□□□□ -0.04
DDX55-202ENST00000354291 PLPP5Q8NEB5 264 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 OR9A1PQ8NGU1 263 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 MFSD3Q96ES6 412 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 ATG10Q9H0Y0 220 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 SYBUQ9NX95 663 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 ALKBH4Q9NXW9 302 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 CBLCQ9ULV8 474 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 SOX13Q9UN79 622 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 PPP2R2CQ9Y2T4 447 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 SCN3AQ9NY46 2000 aa14.81□□□□□ -0.04
DDX55-202ENST00000354291 MXRA5Q9NR99 2828 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.8□□□□□ -0.04
DDX55-202ENST00000354291 FIGNL2A6NMB9 653 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 FAM166BA8MTA8 275 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 H3BMM5 538 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 C8BP07358 591 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 PAMP19021 973 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 MAGEA6P43360 314 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 ADARP55265 1226 aaKnown RBP14.8□□□□□ -0.04
DDX55-202ENST00000354291 CCZ1BP86790 482 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 CCZ1P86791 482 aaPredicted RBP14.8□□□□□ -0.04
DDX55-202ENST00000354291 PPP2R2BQ00005 443 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 PLGLB1Q02325 96 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 FLYWCH1Q4VC44 716 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 MDGA2Q7Z553 956 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 KRTAP1-3Q8IUG1 177 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 CREB3L4Q8TEY5 395 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 FAM222BQ8WU58 562 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 SLCO2A1Q92959 643 aa14.8□□□□□ -0.04
DDX55-202ENST00000354291 PEX11GQ96HA9 241 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms