RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 CILPO75339 1184 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 BPGMP07738 259 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 RAC2P15153 192 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 RBM34P42696 430 aaKnown RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 PRMT2P55345 433 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 KDELC1Q6UW63 502 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 CEACAM20Q6UY09 585 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 HAS1Q92839 578 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 NODALQ96S42 347 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 NENFQ9UMX5 172 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 GMEB1Q9Y692 573 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 PEPDP12955 493 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 IRF9Q00978 393 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 KLF10Q13118 480 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 LASP1Q14847 261 aaKnown RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 LTC4SQ16873 150 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 LRFN4Q6PJG9 635 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 TMCO2Q7Z6W1 182 aaPredicted RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 SDSLQ96GA7 329 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 TUBGCP5Q96RT8 1024 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 PITX2Q99697 317 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 CAMK2AQ9UQM7 478 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 YJEFN3A6XGL0 299 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 RNGTTO60942 597 aaKnown RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 ARL13AQ5H913 290 aaPredicted RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 TPGS2Q68CL5 300 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 SLC16A9Q7RTY1 509 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 NUDT15Q9NV35 164 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 VPS29Q9UBQ0 182 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 AP2A1O95782 977 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 SLC9A3P48764 834 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 ABRAXAS2Q15018 415 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 TYSND1Q2T9J0 566 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 PRELID2Q8N945 189 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 AASSQ9UDR5 926 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 UPK3BL1B0FP48 263 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 UPK3BL2E5RIL1 263 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 CAMK2DQ13557 499 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 CCDC116Q8IYX3 515 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 ARL8BQ9NVJ2 186 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 FZD10Q9ULW2 581 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 A8MVJ9 347 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 ABCB7O75027 752 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 NR1H2P55055 460 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 MAFBQ9Y5Q3 323 aaPredicted RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 TLR4O00206 839 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 PPM1BO75688 479 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 GGT5P36269 586 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 EVX2Q03828 476 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 NEDD4LQ96PU5 975 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 NAA11Q9BSU3 229 aaPredicted RBP13.03□□□□□ -0.32
LMBR1-201ENST00000353442 ATG5Q9H1Y0 275 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 SLC17A6Q9P2U8 582 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 FBXW11Q9UKB1 542 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 RARRES3Q9UL19 164 aa13.03□□□□□ -0.32
LMBR1-201ENST00000353442 LOC102723532A0A0G2JNH3 316 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 FAM237AA0A1B0GTK4 181 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 PFKLP17858 780 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 RORCP51449 518 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 DGKQP52824 942 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 PSPHP78330 225 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 EEF1A1P5Q5VTE0 462 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 RNF111Q6ZNA4 994 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 ENSAO43768 121 aaKnown RBP13.02□□□□□ -0.32
LMBR1-201ENST00000353442 DIRAS1O95057 198 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 GSTM2P28161 218 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 SFTPDP35247 375 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 GDF5P43026 501 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 FNTBP49356 437 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 PON3Q15166 354 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 ECM1Q16610 540 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 EGFLAMQ63HQ2 1017 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 AGAP11Q8TF27 550 aa13.02□□□□□ -0.32
LMBR1-201ENST00000353442 ATRNL1Q5VV63 1379 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 H3BML4 177 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 PPP1R8Q12972 351 aaKnown RBP13.02□□□□□ -0.33
LMBR1-201ENST00000353442 IQCCQ4KMZ1 466 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 ZNF781Q8N8C0 355 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 MFSD8Q8NHS3 518 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 C2orf15Q8WU43 125 aaKnown RBP13.02□□□□□ -0.33
LMBR1-201ENST00000353442 HHIPQ96QV1 700 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 OR51I1Q9H343 314 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 TAS2R1Q9NYW7 299 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 SASH3O75995 380 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 OPN1LWP04000 364 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 CD3GP09693 182 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 GCH1P30793 250 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 FUBP3Q96I24 572 aaKnown RBP eCLIP13.02□□□□□ -0.33
LMBR1-201ENST00000353442 TSPAN18Q96SJ8 248 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 CAPN8A6NHC0 703 aa13.02□□□□□ -0.33
LMBR1-201ENST00000353442 RTCAO00442 366 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms