RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 LRRC14BA6NHZ5 514 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 C4orf51C9J302 202 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 MKRN2OSH3BPM6 223 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 STX16-NPEPL1H3BU86 382 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 PEX12O00623 359 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 STX16O14662 325 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 KALRNO60229 2985 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 RDH16O75452 317 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 EPB42P16452 691 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 HSD17B3P37058 310 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 ADPRMQ3LIE5 342 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 DCAF10Q5QP82 559 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 KIRREL2Q6UWL6 708 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 ABHD13Q7L211 337 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 OR51Q1Q8NH59 317 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 MRPL46Q9H2W6 279 aaKnown RBP20.91■□□□□ 0.94
SNX3-202ENST00000349379 KLHL31Q9H511 634 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 C3orf18Q9UK00 162 aa20.91■□□□□ 0.94
SNX3-202ENST00000349379 TNPO3Q9Y5L0 923 aaKnown RBP20.91■□□□□ 0.94
SNX3-202ENST00000349379 URADA6NGE7 173 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 IDSB3KWA1 339 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 E2F3O00716 465 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 SIX3O95343 332 aaPredicted RBP20.9■□□□□ 0.94
SNX3-202ENST00000349379 ZNF888P0CJ79 500 aaPredicted RBP20.9■□□□□ 0.94
SNX3-202ENST00000349379 DEFB134Q4QY38 66 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 PAGE2BQ5JRK9 111 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 ADNP2Q6IQ32 1131 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 TCTN3Q6NUS6 607 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 LAS2Q8IYD9 372 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 PRSS58Q8IYP2 241 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 TEX9Q8N6V9 391 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 PTGR2Q8N8N7 351 aaPredicted RBP20.9■□□□□ 0.94
SNX3-202ENST00000349379 SCYL1Q96KG9 808 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 YIPF2Q9BWQ6 316 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 HCN3Q9P1Z3 774 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNX3-202ENST00000349379 V9GYY5 206 aaPredicted RBP20.9■□□□□ 0.94
SNX3-202ENST00000349379 BOD1L1Q8NFC6 3051 aa20.9■□□□□ 0.94
SNX3-202ENST00000349379 LRIT2A6NDA9 550 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 K7EM74 188 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 CYC1P08574 325 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 HNRNPH1P31943 449 aaKnown RBP20.89■□□□□ 0.93
SNX3-202ENST00000349379 EMP2P54851 167 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 SOX8P57073 446 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 STXBP1P61764 594 aaKnown RBP20.89■□□□□ 0.93
SNX3-202ENST00000349379 SKP1P63208 163 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 RBBP7Q16576 425 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 TOR1AIP1Q5JTV8 583 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 GRHL2Q6ISB3 625 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 EMBQ6PCB8 327 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 SH2D5Q6ZV89 423 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 OR11G2Q8NGC1 345 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 GAL3ST3Q96A11 431 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 MS4A6EQ96DS6 147 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 MESP1Q9BRJ9 268 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 CLK4Q9HAZ1 481 aaKnown RBP20.89■□□□□ 0.93
SNX3-202ENST00000349379 TMEM216Q9P0N5 145 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 TBK1Q9UHD2 729 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 TP53TG5Q9Y2B4 290 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 SPTA1P02549 2419 aa20.89■□□□□ 0.93
SNX3-202ENST00000349379 ZNF860A6NHJ4 632 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 ANKDD1BA6NHY2 528 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 PCDH17O14917 1159 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 JRKO75564 520 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 B3GALT4O96024 378 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 NUDT17P0C025 328 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 IL10P22301 178 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 XCR1P46094 333 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 PIK3CGP48736 1102 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 CCL11P51671 97 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 GTF2H2Q13888 395 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 ERCC6LQ2NKX8 1250 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 LACTB2Q53H82 288 aaPredicted RBP20.88■□□□□ 0.93
SNX3-202ENST00000349379 GTF2H2CQ6P1K8 395 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 TMEM205Q6UW68 189 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 GOLGA7Q7Z5G4 137 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 OR5T3Q8NGG3 340 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 CAVIN3Q969G5 261 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 UBE2E3Q969T4 207 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 FBXL4Q9UKA2 621 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 TSC22D4Q9Y3Q8 395 aa20.88■□□□□ 0.93
SNX3-202ENST00000349379 LOC102723996A0A087X1L8 192 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 UGDHO60701 494 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 DNAJB6O75190 326 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 SMIM24O75264 130 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 PDGFAP04085 211 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 GSTA1P08263 222 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 RPS17P08708 135 aaKnown RBP20.87■□□□□ 0.93
SNX3-202ENST00000349379 PYGBP11216 843 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 EEF1DP29692 281 aaKnown RBP20.87■□□□□ 0.93
SNX3-202ENST00000349379 HNF4AP41235 474 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 RAB8AP61006 207 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 C19orf57Q0VDD7 668 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 HIST2H2ACQ16777 129 aaPredicted RBP20.87■□□□□ 0.93
SNX3-202ENST00000349379 TUBB8Q3ZCM7 444 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 LIPJQ5W064 366 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 HIST2H2AA3Q6FI13 130 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 CYP4X1Q8N118 509 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 FDCSPQ8NFU4 85 aa20.87■□□□□ 0.93
SNX3-202ENST00000349379 EPS8L3Q8TE67 593 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms