RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
SMTN-202ENST00000347557 EPHB3P54753 998 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 RPS13P62277 151 aaKnown RBP14.04□□□□□ -0.16
SMTN-202ENST00000347557 STARD3Q14849 445 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 NDUFA5Q16718 116 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 ZNF783Q6ZMS7 281 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 RFPL4BQ6ZWI9 263 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 TMEM150AQ86TG1 271 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 NPAS3Q8IXF0 933 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 CIDECQ96AQ7 238 aaPredicted RBP14.04□□□□□ -0.16
SMTN-202ENST00000347557 C7orf34Q96L11 122 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 CEP19Q96LK0 163 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 DOHHQ9BU89 302 aa14.04□□□□□ -0.16
SMTN-202ENST00000347557 FAM120CQ9NX05 1096 aaKnown RBP14.04□□□□□ -0.16
SMTN-202ENST00000347557 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.03□□□□□ -0.16
SMTN-202ENST00000347557 ARHGEF33A8MVX0 844 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 FAM227AF5H4B4 570 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 RFPL2O75678 378 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 C6orf47O95873 294 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 C1SP09871 688 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 IL1RNP18510 177 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 CHI3L1P36222 383 aaPredicted RBP14.03□□□□□ -0.16
SMTN-202ENST00000347557 ETV3P41162 512 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 SLC6A12P48065 614 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 HNMTP50135 292 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 CRYBA2P53672 197 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 GPNMBQ14956 572 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 SF3B4Q15427 424 aaKnown RBP eCLIP14.03□□□□□ -0.164e-10■■■■■ 40.5
SMTN-202ENST00000347557 AGTRAPQ6RW13 159 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMTN-202ENST00000347557 OTOP2Q7RTS6 562 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 AKAP14Q86UN6 197 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 FAM124AQ86V42 546 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 OR8H2Q8N162 312 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 ZNF366Q8N895 744 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 NDUFAF4Q9P032 175 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 SOCS5O75159 536 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 RPLP0P05388 317 aaKnown RBP14.03□□□□□ -0.16
SMTN-202ENST00000347557 POLR2EP19388 210 aaKnown RBP14.03□□□□□ -0.16
SMTN-202ENST00000347557 ACVR2AP27037 513 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 CTAG1AP78358 180 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 ATAD3BQ5T9A4 648 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 SIGIRRQ6IA17 410 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 DESI1Q6ICB0 168 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.03□□□□□ -0.16
SMTN-202ENST00000347557 TCAIMQ8N3R3 496 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 OVCA2Q8WZ82 227 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 HRASLS5Q96KN8 279 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 SAMD11Q96NU1 681 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 MRPL9Q9BYD2 267 aaKnown RBP14.03□□□□□ -0.16
SMTN-202ENST00000347557 LYVE1Q9Y5Y7 322 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 CASP8AP2Q9UKL3 1982 aa14.03□□□□□ -0.16
SMTN-202ENST00000347557 PLXNA4Q9HCM2 1894 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 AGAP5A6NIR3 686 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 PCDH17O14917 1159 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 SCAMP2O15127 329 aaKnown RBP14.02□□□□□ -0.16
SMTN-202ENST00000347557 SLC16A8O95907 504 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 PRKACBP22694 351 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 SPINT3P49223 89 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 DAB2P98082 770 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 FAHD1Q6P587 224 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 UBE2Q1Q7Z7E8 422 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 FAM217AQ8IXS0 508 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 TAGAPQ8N103 731 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 SYNPOQ8N3V7 929 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 OR7G1Q8NGA0 311 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 HUS1BQ8NHY5 278 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 SORCS1Q8WY21 1168 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 TMEM159Q96B96 161 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 TMEM169Q96HH4 297 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 SLC35A5Q9BS91 424 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 CCM2Q9BSQ5 444 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 OR51B5Q9H339 312 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 ERVK13-1Q9NX77 482 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 ANKMY1Q9P2S6 941 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 PSORS1C1Q9UIG5 152 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 ERVW-1Q9UQF0 538 aa14.02□□□□□ -0.16
SMTN-202ENST00000347557 CLCA1A8K7I4 914 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 KPNA5O15131 536 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 TSPAN6O43657 245 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 ASNA1O43681 348 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 FEN1P39748 380 aaKnown RBP14.02□□□□□ -0.17
SMTN-202ENST00000347557 MAPK8P45983 427 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 HBA1P69905 142 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 CSTF3Q12996 717 aaKnown RBP14.02□□□□□ -0.17
SMTN-202ENST00000347557 MTAPQ13126 283 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 TSTQ16762 297 aaKnown RBP14.02□□□□□ -0.17
SMTN-202ENST00000347557 DNAJC22Q8N4W6 341 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 PARP16Q8N5Y8 322 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 RAET1EQ8TD07 263 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 ASZ1Q8WWH4 475 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 CLP1Q92989 425 aaKnown RBP14.02□□□□□ -0.17
SMTN-202ENST00000347557 EFHD2Q96C19 240 aaPredicted RBP14.02□□□□□ -0.17
SMTN-202ENST00000347557 IGSF21Q96ID5 467 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 OR5M11Q96RB7 305 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 MMP27Q9H306 513 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 NINQ8N4C6 2090 aa14.02□□□□□ -0.17
SMTN-202ENST00000347557 A0A1W2PRU2 124 aa14.01□□□□□ -0.17
SMTN-202ENST00000347557 CLDN24A6NM45 220 aa14.01□□□□□ -0.17
SMTN-202ENST00000347557 MSL3P1P0C860 447 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms