RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CNDP2Q96KP4 475 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 GPATCH2Q9NW75 528 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 PSME2Q9UL46 239 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 ASF1AQ9Y294 204 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 TCF20Q9UGU0 1960 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 J3QRK9 145 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 ADRB3P13945 408 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 MYOGP15173 224 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 ALDH4A1P30038 563 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 GJA8P48165 433 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 LSM3P62310 102 aaKnown RBP14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 VEZF1Q14119 521 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 NPTX1Q15818 432 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 KLHDC8AQ8IYD2 350 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 OR5AR1Q8NGP9 310 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 PPCDCQ96CD2 204 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 C7orf34Q96L11 122 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 CCDC177Q9NQR7 707 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 GCM2O75603 506 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 FADS2O95864 444 aaKnown RBP14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 ITGB7P26010 798 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 PNLIPRP1P54315 467 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 MLLT10P55197 1068 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 CYP4F2P78329 520 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 HIST2H2ACQ16777 129 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 BCL7AQ4VC05 210 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 HIST2H2AA3Q6FI13 130 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 GPR153Q6NV75 609 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 GALNT18Q6P9A2 607 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 PLA2G15Q8NCC3 412 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF540Q8NDQ6 660 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 NFKBIDQ8NI38 313 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 WFIKKN2Q8TEU8 576 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 EFCAB11Q9BUY7 163 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF282Q9UDV7 671 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 ATG2BQ96BY7 2078 aa14.29□□□□□ -0.12
VIPAS39-202ENST00000343765 PSMD11O00231 422 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 RNASET2O00584 256 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 FAM20BO75063 409 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 NDUFS2O75306 463 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 C9P02748 559 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 CCDC159P0C7I6 412 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 PCGF2P35227 344 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 CHI3L1P36222 383 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 MPEG1Q2M385 716 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 HNRNPA1L2Q32P51 320 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 PAGE2BQ5JRK9 111 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 NXPE4Q6UWF7 544 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 SLC16A12Q6ZSM3 486 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF784Q8NCA9 323 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 C16orf78Q8WTQ4 265 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 FAR1Q8WVX9 515 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 SMG7Q92540 1137 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 KCNC2Q96PR1 638 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 APOL4Q9BPW4 351 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 SGPP1Q9BX95 441 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 RAD21L1Q9H4I0 556 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 DYRK4Q9NR20 520 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 TMEM184CQ9NVA4 438 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 TRIM64BA6NI03 449 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF99A8MXY4 864 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 BCAS1O75363 584 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 JRKO75564 520 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 HNRNPA1P09651 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 PPIBP23284 216 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 MAPK9P45984 424 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 RPP38P78345 283 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 ELP6Q0PNE2 266 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 PRSS53Q2L4Q9 553 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 KIAA1614Q5VZ46 1190 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 PIWIL3Q7Z3Z3 882 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 CAMKMTQ7Z624 323 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 CCDC71Q8IV32 467 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 FNDC8Q8TC99 324 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 HCAR2Q8TDS4 363 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 FKBP10Q96AY3 582 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 TBC1D20Q96BZ9 403 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 METTL2AQ96IZ6 378 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 DOHHQ9BU89 302 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 DEC1Q9P2X7 70 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 CORO2BQ9UQ03 480 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 HEPACAM2A8MVW5 462 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 TMEM229AB2RXF0 380 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 HOXC11O43248 304 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 MT-ND2P03891 347 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 IL3P08700 152 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 FURINP09958 794 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 ITIH1P19827 911 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 PSMB9P28065 219 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 PRIM2P49643 509 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 BMXP51813 675 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 CAMK2GQ13555 558 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 KEAP1Q14145 624 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF234Q14588 700 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 IQCCQ4KMZ1 466 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 RNF130Q86XS8 419 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 CROCCP3Q8IVE0 287 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 FBLIM1Q8WUP2 373 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 RORBQ92753 470 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 BHLHE41Q9C0J9 482 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms