RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SLC22A16Q86VW1 577 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 POMGNT2Q8NAT1 580 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 GPR26Q8NDV2 337 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 WDR48Q8TAF3 677 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MAELQ96JY0 434 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 RTP3Q9BQQ7 232 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MARCH7Q9H992 704 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TMEM45AQ9NWC5 275 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MRPL39Q9NYK5 338 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 DNAJC27Q9NZQ0 273 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 GRXCR2A6NFK2 248 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 NPIPB15A6NHN6 443 aaPredicted RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 RIIAD1A6NNX1 92 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SSNA1O43805 119 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SCN2BO60939 215 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SLC16A8O95907 504 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ARNTP27540 789 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 PPIGQ13427 754 aaKnown RBP eCLIP6.94□□□□□ -1.3
VCAN-202ENST00000342785 FAM220AQ7Z4H9 259 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 FUNDC1Q8IVP5 155 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 CBARPQ8N350 705 aaPredicted RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 PGBD5Q8N414 524 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HDDC3Q8N4P3 179 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ZNF433Q8N7K0 673 aaPredicted RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 TTLQ8NG68 377 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TP53INP1Q96A56 240 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 VMP1Q96GC9 406 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 APIPQ96GX9 242 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 RBM18Q96H35 190 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 LMLNQ96KR4 655 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 EGLN2Q96KS0 407 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SPACA7Q96KW9 195 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 GPR78Q96P69 363 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 IL17FQ96PD4 163 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SPHK2Q9NRA0 654 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 CREBZFQ9NS37 354 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ELOVL2Q9NXB9 296 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MROH6A6NGR9 719 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TNFRSF10BO14763 440 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ADAM12O43184 909 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 S100A1P23297 94 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HOXC13P31276 330 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 GALNT7Q86SF2 657 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 DRAXINQ8NBI3 349 aaPredicted RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 CHST14Q8NCH0 376 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SHKBP1Q8TBC3 707 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 NETO1Q8TDF5 533 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HERVK_113Q902F9 699 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SRMSQ9H3Y6 488 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HEBP1Q9NRV9 189 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HCSTQ9UBK5 93 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TOGARAM1Q9Y4F4 1720 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 LRRC72A6NJI9 287 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HMGN1P05114 100 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ALPPP05187 535 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SRCP12931 536 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HOXD8P13378 290 aaPredicted RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 RORCP51449 518 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 FADDQ13158 208 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 RAPSNQ13702 412 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ZNF805Q5CZA5 627 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 BORAQ6PGQ7 559 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 NANOGNBQ7Z5D8 188 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MINDY2Q8NBR6 621 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 FIBINQ8TAL6 211 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 FAM129BQ96TA1 746 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MMP27Q9H306 513 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MTG2Q9H4K7 406 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 CARS2Q9HA77 564 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 SLC28A3Q9HAS3 691 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TBCCD1Q9NVR7 557 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MKLN1Q9UL63 735 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ING4Q9UNL4 249 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 A0A1B0GVG6 124 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 EIF3FO00303 357 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 RASGRP1O95267 797 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 IL3P08700 152 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 GSTM3P21266 225 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 ITPKBP27987 946 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 BNC1Q01954 994 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 DSC1Q08554 894 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TMEM236Q5W0B7 351 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 RANBP3LQ86VV4 465 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 TMEM25Q86YD3 366 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 TRAM1L1Q8N609 369 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 CELF5Q8N6W0 485 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 OR10H4Q8NGA5 316 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 BPIFB1Q8TDL5 484 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 UFD1Q92890 307 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 OTUB2Q96DC9 234 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 RAB11FIP5Q9BXF6 653 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 UTS2RQ9UKP6 389 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 N4BP2Q86UW6 1770 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 COL22A1Q8NFW1 1626 aaPredicted RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 GSRP00390 522 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 GSTM2P28161 218 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 RPL34P49207 117 aaKnown RBP6.93□□□□□ -1.3
VCAN-202ENST00000342785 ERVK-21P61565 698 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 COX18Q8N8Q8 333 aa6.93□□□□□ -1.3
VCAN-202ENST00000342785 HUS1BQ8NHY5 278 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms