RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 CAPN5O15484 640 aaPredicted RBP21.53■■□□□ 1.04
TRIM28-202ENST00000341753 CKMT1AP12532 417 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 POU1F1P28069 291 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 CHIT1Q13231 466 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 GPR155Q7Z3F1 870 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 ATCAYQ86WG3 371 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 VRK3Q8IV63 474 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 LAX1Q8IWV1 398 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 UBE2J2Q8N2K1 259 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 MCCC1Q96RQ3 725 aaPredicted RBP21.53■■□□□ 1.04
TRIM28-202ENST00000341753 PHOX2BQ99453 314 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 RAD9AQ99638 391 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 BARHL1Q9BZE3 327 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 RDH14Q9HBH5 336 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 CFL2Q9Y281 166 aa21.53■■□□□ 1.04
TRIM28-202ENST00000341753 SLITRK5O94991 958 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 SNX4O95219 450 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 TRBC1P01850 177 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 AOAHP28039 575 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 HNF1BP35680 557 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 RPS19P39019 145 aaKnown RBP21.52■■□□□ 1.04
TRIM28-202ENST00000341753 CDK10Q15131 360 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 TRIM60Q495X7 471 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 ZNF852Q6ZMS4 543 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 DEFB128Q7Z7B8 93 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 VN1R3Q9BXE9 311 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 RHCGQ9UBD6 479 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 ZNF840PA6NDX5 716 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 PRAMEF25A6NGN4 478 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 CRATP43155 626 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 GANABQ14697 944 aaKnown RBP21.52■■□□□ 1.04
TRIM28-202ENST00000341753 COX20Q5RI15 118 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 MLIPQ5VWP3 458 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 RFLNAQ6ZTI6 216 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 BBS7Q8IWZ6 715 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 FYTTD1Q96QD9 318 aaKnown RBP21.52■■□□□ 1.04
TRIM28-202ENST00000341753 SNX18Q96RF0 628 aa21.52■■□□□ 1.04
TRIM28-202ENST00000341753 PCDH17O14917 1159 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 TPD52L2O43399 206 aaKnown RBP21.51■■□□□ 1.03
TRIM28-202ENST00000341753 SMAD6O43541 496 aaKnown RBP21.51■■□□□ 1.03
TRIM28-202ENST00000341753 PQBP1O60828 265 aaKnown RBP21.51■■□□□ 1.03
TRIM28-202ENST00000341753 ETV6P41212 452 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 SRSF11Q05519 484 aaKnown RBP21.51■■□□□ 1.03
TRIM28-202ENST00000341753 PLD1Q13393 1074 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 VEZF1Q14119 521 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 RGNQ15493 299 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 HKDC1Q2TB90 917 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 MACC1Q6ZN28 852 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 RAB43Q86YS6 212 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 FAM9CQ8IZT9 166 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 DUSP26Q9BV47 211 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 ASPNQ9BXN1 380 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 SNTG1Q9NSN8 517 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 KLK4Q9Y5K2 254 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 FAM227AF5H4B4 570 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 WWP2O00308 870 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 SCO2O43819 266 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 STC2O76061 302 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 ETFAP13804 333 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 SLC43A3Q8NBI5 491 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 CSGALNACT1Q8TDX6 532 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 PRRG3Q9BZD7 231 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 PADI2Q9Y2J8 665 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 SCN5AQ14524 2016 aa21.51■■□□□ 1.03
TRIM28-202ENST00000341753 EFCAB10A6NFE3 127 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 PRKCAP17252 672 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 ATN1P54259 1190 aaPredicted RBP21.5■■□□□ 1.03
TRIM28-202ENST00000341753 OLR1P78380 273 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 MXD1Q05195 221 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 BOP1Q14137 746 aaKnown RBP21.5■■□□□ 1.03
TRIM28-202ENST00000341753 PPP2R2DQ66LE6 453 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 ZNF367Q7RTV3 350 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 NXPE1Q8N323 547 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 ASB15Q8WXK1 588 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 IL4I1Q96RQ9 567 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 TCF25Q9BQ70 676 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 CCDC32Q9BV29 185 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 TMEM121BQ9BXQ6 578 aaPredicted RBP21.5■■□□□ 1.03
TRIM28-202ENST00000341753 RERGLQ9H628 205 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 RANGRFQ9HD47 186 aaPredicted RBP21.5■■□□□ 1.03
TRIM28-202ENST00000341753 KLHL20Q9Y2M5 609 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 MEIOCA2RUB1 952 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 GABRR3A8MPY1 467 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 CCRL2O00421 344 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 CD22P20273 847 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 PTGES3Q15185 160 aaKnown RBP21.5■■□□□ 1.03
TRIM28-202ENST00000341753 CCDC58Q4VC31 144 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 Q5BKY6 102 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 NPAS4Q8IUM7 802 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 GPR26Q8NDV2 337 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 TRMT61AQ96FX7 289 aaKnown RBP21.5■■□□□ 1.03
TRIM28-202ENST00000341753 P2RY13Q9BPV8 354 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 CHST8Q9H2A9 424 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 ABCB8Q9NUT2 735 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 NUFIP1Q9UHK0 495 aaKnown RBP21.5■■□□□ 1.03
TRIM28-202ENST00000341753 POFUT2Q9Y2G5 429 aa21.5■■□□□ 1.03
TRIM28-202ENST00000341753 ADAMDEC1O15204 470 aa21.49■■□□□ 1.03
TRIM28-202ENST00000341753 SELENOWP63302 87 aa21.49■■□□□ 1.03
TRIM28-202ENST00000341753 HECTD3Q5T447 861 aa21.49■■□□□ 1.03
TRIM28-202ENST00000341753 GPR156Q8NFN8 814 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms