RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 OR2T29Q8NH02 315 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 OR5P2Q8WZ92 322 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 PCDHGA12O60330 932 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 IL3P08700 152 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 TMED10P49755 219 aaKnown RBP18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 ABRAXAS2Q15018 415 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 UXS1Q8NBZ7 420 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 ARRDC2Q8TBH0 407 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 ARNT2Q9HBZ2 717 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 CKLFQ9UBR5 152 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 SOBPA7XYQ1 873 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 CASKO14936 926 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 XKP51811 444 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 DAG1Q14118 895 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 TMEM35AQ53FP2 167 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 UBAP2Q5T6F2 1119 aaKnown RBP18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 LHX8Q68G74 356 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 DTD2Q96FN9 168 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 OR51V1Q9H2C8 321 aa18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.88■□□□□ 0.61
SEMA6C-201ENST00000341697 A0A0U1RQS6 177 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PGRMC2O15173 223 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 BCKDHAP12694 445 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 ACADVLP49748 655 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 SLAMF1Q13291 335 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 KIAA1143Q96AT1 154 aaPredicted RBP18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 SLC25A36Q96CQ1 311 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 MRPL38Q96DV4 380 aaKnown RBP18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PTCHD1Q96NR3 888 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 F2RL3Q96RI0 385 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 CMTM6Q9NX76 183 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 TAS2R9Q9NYW1 312 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 WDR45Q9Y484 360 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 MYH15Q9Y2K3 1946 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 HHLA1C9JL84 531 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 EI24O14681 340 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 SOX9P48436 509 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 GRB7Q14451 532 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PLXDC1Q8IUK5 500 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 CCDC116Q8IYX3 515 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 HEBP1Q9NRV9 189 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 FAM155AB1AL88 458 aaPredicted RBP18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 MUSKO15146 869 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 LATO43561 262 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 ZNF823P16415 610 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 STAT5AP42229 794 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 ZNF140P52738 457 aaPredicted RBP18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PUS10Q3MIT2 529 aaKnown RBP18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 ZNF789Q5FWF6 425 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 LINC00471Q8N535 108 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 OR4K17Q8NGC6 315 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 OR52B6Q8NGF0 335 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 CD200R1Q8TD46 325 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PYURFQ96I23 114 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 HHIPQ96QV1 700 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PAPPA2Q9BXP8 1791 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 AURKAO14965 403 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 GSTM3P21266 225 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PSMA1P25786 263 aaKnown RBP18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 NUDT1P36639 197 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 TAB1Q15750 504 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 TANGO2Q6ICL3 276 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 REEP3Q6NUK4 255 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 FBXL8Q96CD0 374 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 EPYCQ99645 322 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 RBCK1Q9BYM8 510 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 PRODH2Q9UF12 536 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 RFXAPO00287 272 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 TNFRSF10BO14763 440 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 HMGN1P05114 100 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 GSTT1P30711 240 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 CXCL12P48061 93 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 USP53Q70EK8 1073 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 KCNN1Q92952 543 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 L3HYPDHQ96EM0 354 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 ATXN10Q9UBB4 475 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 SCN9AQ15858 1988 aa18.87■□□□□ 0.61
SEMA6C-201ENST00000341697 MYOGP15173 224 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 AQP4P55087 323 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 ADAM17P78536 824 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 SGCBQ16585 318 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 CATSPEREQ5SY80 951 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 OR52E4Q8NGH9 312 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 HUS1BQ8NHY5 278 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 NODALQ96S42 347 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 TXLNGYQ9BZA5 131 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 IGSF5Q9NSI5 407 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 TMEM184CQ9NVA4 438 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 ARAP2Q8WZ64 1704 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 FEZF1A0PJY2 475 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 C1orf226A1L170 272 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 OR2B3O76000 313 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 SLC16A8O95907 504 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 RENP00797 406 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 HOXC12P31275 282 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 GMPRP36959 345 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 RGRP47804 291 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 MRPS21P82921 87 aaKnown RBP18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 TBX21Q9UL17 535 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms