RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZNF823P16415 610 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 OR1D5P58170 312 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 CSNK2BP67870 215 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 RCAN2Q14206 197 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 OR4F3Q6IEY1 312 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 KLHDC8AQ8IYD2 350 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 ULK2Q8IYT8 1036 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 OR8K5Q8NH50 307 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 CCDC74AQ96AQ1 378 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 G6PC3Q9BUM1 346 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 TRNAU1APQ9NX07 287 aaKnown RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 MYH7BA7E2Y1 1941 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 C1orf226A1L170 272 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 NUAK1O60285 661 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 TSPAN19P0C672 248 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 ABOP16442 354 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 MATN1P21941 496 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 SMAD2Q15796 467 aaKnown RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 DCST1Q5T197 706 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 LILRA6Q6PI73 481 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 DEFB124Q8NES8 71 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 BIRC7Q96CA5 298 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 FER1L6-AS2Q96M78 137 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 Q96MT0 163 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 MMADHCQ9H3L0 296 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 POU2F3Q9UKI9 436 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 SIGLEC6O43699 453 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 ACADLP28330 430 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 SLC14A2Q15849 920 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 TMEM196Q5HYL7 178 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 RPTNQ6XPR3 784 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 PELI2Q9HAT8 420 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 WASHC1A8K0Z3 465 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 TNFRSF10AO00220 468 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 ENTPD5O75356 428 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 CPNE6O95741 557 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 GABRA3P34903 492 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 EEF1A2Q05639 463 aaKnown RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 SCARB2Q14108 478 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 CXorf57Q6NSI4 855 aaKnown RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 ADAMTSL4Q6UY14 1074 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 WASH2PQ6VEQ5 465 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 OAFQ86UD1 273 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 NLGN4XQ8N0W4 816 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 MAGEE2Q8TD90 523 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 TMEM234Q8WY98 164 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 RMND5BQ96G75 393 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 TCTN2Q96GX1 697 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 MCM8Q9UJA3 840 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 IKZF2Q9UKS7 526 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 MGRN1O60291 552 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 SLC16A8O95907 504 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 RPS3P23396 243 aaKnown RBP eCLIP12.32□□□□□ -0.44
LIN54-201ENST00000340417 CCL11P51671 97 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 EPS8Q12929 822 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 LASP1Q14847 261 aaKnown RBP12.32□□□□□ -0.44
LIN54-201ENST00000340417 ZCCHC12Q6PEW1 402 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 PACS2Q86VP3 889 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 LRRC25Q8N386 305 aaPredicted RBP12.32□□□□□ -0.44
LIN54-201ENST00000340417 FAR1Q8WVX9 515 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 COL21A1Q96P44 957 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 HIST1H2AAQ96QV6 131 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 LGALS13Q9UHV8 139 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 C3orf18Q9UK00 162 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 RIIAD1A6NNX1 92 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 FLRT2O43155 660 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 DLX3O60479 287 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 AHSA1O95433 338 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 ZXDAP98168 799 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 GALNT15Q8N3T1 639 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 THAP11Q96EK4 314 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 C7orf26Q96N11 449 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 PADI1Q9ULC6 663 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 MAN2B2Q9Y2E5 1009 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 AURKAO14965 403 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 HCRTR2O43614 444 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 MAN1A2O60476 641 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 SRYQ05066 204 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 DOC2AQ14183 400 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 ZNF311Q5JNZ3 666 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 SFRP1Q8N474 314 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 OLFM3Q96PB7 478 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
LIN54-201ENST00000340417 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.32□□□□□ -0.44
LIN54-201ENST00000340417 CLEC4EQ9ULY5 219 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 EIF3FO00303 357 aaPredicted RBP12.32□□□□□ -0.44
LIN54-201ENST00000340417 GJB3O75712 270 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 MMP12P39900 470 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 PIK3CBP42338 1070 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 KLF10Q13118 480 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 GLYATQ6IB77 296 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 ARL10Q8N8L6 244 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 GATSQ8NAP1 163 aa12.32□□□□□ -0.44
LIN54-201ENST00000340417 ASPNQ9BXN1 380 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms