RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SH3BP5O60239 455 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 TPST2O60704 377 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 AP2A2O94973 939 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 ITGB7P26010 798 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 GJA4P35212 333 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 OPRD1P41143 372 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 CLK3P49761 638 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 MVKQ03426 396 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 ZBED5Q49AG3 693 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 PRAMEF14Q5SWL7 426 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 C6orf141Q5SZD1 244 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 PRAMEF13Q5VWM6 474 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 TMEM236Q5W0B7 351 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 XAF1Q6GPH4 301 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 ANKRD53Q8N9V6 530 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 OR9Q2Q8NGE9 314 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 OR5K1Q8NHB7 308 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 CHTF18Q8WVB6 975 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SNRNP27Q8WVK2 155 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 FGF14Q92915 247 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 FCRL4Q96PJ5 515 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 RBM4BQ9BQ04 359 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 RBM4Q9BWF3 364 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 RHBDL2Q9NX52 303 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 THUMPD1Q9NXG2 353 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 ASIC5Q9NY37 505 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 NDUFA13Q9P0J0 144 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 RAB23Q9ULC3 237 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 PRAMEF25A6NGN4 478 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 H0YIV9 168 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 ZNF197O14709 1029 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SLC16A5O15375 505 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 PAPLNO95428 1278 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 RETP07949 1114 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 C1GALT1C1LP0DN25 315 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 DRD3P35462 400 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 MLLT10P55197 1068 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 CDH12P55289 794 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 TAS2R38P59533 333 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 CSTF3Q12996 717 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 MTAPQ13126 283 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 PARM1Q6UWI2 310 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SPARTQ8N0X7 666 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 HDDC3Q8N4P3 179 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 C16orf78Q8WTQ4 265 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 ATL1Q8WXF7 558 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SMARCD2Q92925 531 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 GTPBP3Q969Y2 492 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 PPCDCQ96CD2 204 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 TIFAQ96CG3 184 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 VPS35Q96QK1 796 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SLC6A16Q9GZN6 736 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 CD320Q9NPF0 282 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SLAMF7Q9NQ25 335 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 MIEF1Q9NQG6 463 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 PCDHB11Q9Y5F2 797 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 KIAA1549LQ6ZVL6 1849 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 EDDM13A0A1B0GTR0 161 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 TSPAN11A1L157 253 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 H0Y8X5 98 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 M0QX08 132 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SLC1A7O00341 560 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 KAT7O95251 611 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 CCNDBP1O95273 360 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 GDI1P31150 447 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 HPCAL1P37235 193 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 IDH2P48735 452 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 PRIM2P49643 509 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 HLCSP50747 726 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SRSF11Q05519 484 aaKnown RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 DBPQ10586 325 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 CAMK2GQ13555 558 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 FGL2Q14314 439 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 WDR53Q7Z5U6 358 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 AMZ2Q86W34 360 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 CCDC71Q8IV32 467 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 GOLM1Q8NBJ4 401 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 SP7Q8TDD2 431 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 ZFP90Q8TF47 636 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 GAB3Q8WWW8 586 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 WFDC6Q9BQY6 131 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 KRT84Q9NSB2 600 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 TEX10Q9NXF1 929 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 PADI4Q9UM07 663 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 TMED5Q9Y3A6 229 aa8.48□□□□□ -1.05
SNCA-201ENST00000336904 MYO10Q9HD67 2058 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 COL6A3P12111 3177 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 C1orf226A1L170 272 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 GRXCR2A6NFK2 248 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 AGRPO00253 132 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 OR1F1O43749 312 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 LCMT2O60294 686 aaKnown RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 NFATC1O95644 943 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 ANGPTL1O95841 491 aa8.47□□□□□ -1.05
SNCA-201ENST00000336904 TBX6O95947 436 aaPredicted RBP8.47□□□□□ -1.05
SNCA-201ENST00000336904 SRPRAP08240 638 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms