RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 TEFMQ96QE5 360 aaKnown RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 AKTIPQ9H8T0 292 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 PCDHGA11Q9Y5H2 935 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 CFAP47Q6ZTR5 3102 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 KNTC1P50748 2209 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 PTPRBP23467 1997 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 LRIT2A6NDA9 550 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 PLPP1O14494 284 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 HDAC3O15379 428 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 EEDO75530 441 aaKnown RBP15.72■□□□□ 0.11
SHOX-201ENST00000334060 ANKRD34CP0C6C1 535 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 ZNF888P0CJ79 500 aaPredicted RBP15.72■□□□□ 0.11
SHOX-201ENST00000334060 CEACAM1P13688 526 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 ARL4DP49703 201 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 RPS15AP62244 130 aaKnown RBP15.72■□□□□ 0.11
SHOX-201ENST00000334060 TBL3Q12788 808 aaKnown RBP15.72■□□□□ 0.11
SHOX-201ENST00000334060 PAGE2BQ5JRK9 111 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 OR5T3Q8NGG3 340 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 C17orf62Q9BQA9 187 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 TMEM120AQ9BXJ8 343 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 SNX6Q9UNH7 406 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 CLCA2Q9UQC9 943 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 POLR3HQ9Y535 204 aaPredicted RBP15.72■□□□□ 0.11
SHOX-201ENST00000334060 PCDHGA1Q9Y5H4 931 aa15.72■□□□□ 0.11
SHOX-201ENST00000334060 ANKDD1BA6NHY2 528 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 WASHC1A8K0Z3 465 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 C9JVG2 144 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 LSM1O15116 133 aaKnown RBP15.71■□□□□ 0.11
SHOX-201ENST00000334060 PRKRAO75569 313 aaKnown RBP15.71■□□□□ 0.11
SHOX-201ENST00000334060 ALDOCP09972 364 aaKnown RBP15.71■□□□□ 0.11
SHOX-201ENST00000334060 TACR1P25103 407 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 RAE1P78406 368 aaKnown RBP15.71■□□□□ 0.11
SHOX-201ENST00000334060 SYT16Q17RD7 645 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 GKAP1Q5VSY0 366 aaPredicted RBP15.71■□□□□ 0.11
SHOX-201ENST00000334060 PWWP2BQ6NUJ5 590 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 EPGNQ6UW88 154 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 C10orf82Q8WW14 230 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 MS4A6EQ96DS6 147 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 SLC6A16Q9GZN6 736 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 MEAF6Q9HAF1 191 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 DLGAP4Q9Y2H0 992 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 LOXL2Q9Y4K0 774 aa15.71■□□□□ 0.11
SHOX-201ENST00000334060 E9PBE3 544 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 KLHL41O60662 606 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 KRT6AP02538 564 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 KRT6BP04259 564 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 ALOX15P16050 662 aaPredicted RBP15.71■□□□□ 0.1
SHOX-201ENST00000334060 GRK3P35626 688 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 KRT6CP48668 564 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 DIO3P55073 304 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 SLC9A5Q14940 896 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 HIST2H2ACQ16777 129 aaPredicted RBP15.71■□□□□ 0.1
SHOX-201ENST00000334060 LSM12Q3MHD2 195 aaKnown RBP15.71■□□□□ 0.1
SHOX-201ENST00000334060 C3orf38Q5JPI3 329 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 C1orf189Q5VU69 101 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 HIST2H2AA3Q6FI13 130 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 LCN10Q6JVE6 187 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 C1orf52Q8N6N3 182 aaKnown RBP15.71■□□□□ 0.1
SHOX-201ENST00000334060 AMER2Q8N7J2 671 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 ZNF285Q96NJ3 590 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 IRAK4Q9NWZ3 460 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 ANKMY1Q9P2S6 941 aa15.71■□□□□ 0.1
SHOX-201ENST00000334060 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.71■□□□□ 0.1
SHOX-201ENST00000334060 ERI3O43414 337 aaKnown RBP15.7■□□□□ 0.1
SHOX-201ENST00000334060 NTRK1P04629 796 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 ITGAXP20702 1163 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 CCKBRP32239 447 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 NME5P56597 212 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 RPL38P63173 70 aaKnown RBP15.7■□□□□ 0.1
SHOX-201ENST00000334060 MAT1AQ00266 395 aaKnown RBP15.7■□□□□ 0.1
SHOX-201ENST00000334060 ILKQ13418 452 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 LAPTM5Q13571 262 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 KIAA0040Q15053 153 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 NR6A1Q15406 480 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 PRTGQ2VWP7 1150 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 DEFB134Q4QY38 66 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 SPDYAQ5MJ70 313 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 FAM69BQ5VUD6 431 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 KHDRBS2Q5VWX1 349 aaKnown RBP15.7■□□□□ 0.1
SHOX-201ENST00000334060 TRIM46Q7Z4K8 759 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 OR8K5Q8NH50 307 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 CLHC1Q8NHS4 586 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 UTP15Q8TED0 518 aaKnown RBP15.7■□□□□ 0.1
SHOX-201ENST00000334060 TUBGCP3Q96CW5 907 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 EGLN2Q96KS0 407 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 SH3GL3Q99963 347 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 REXO4Q9GZR2 422 aaKnown RBP15.7■□□□□ 0.1
SHOX-201ENST00000334060 NT5DC2Q9H857 520 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 PISDQ9UG56 409 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 BAIAP2L1Q9UHR4 511 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 PLCL2Q9UPR0 1127 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 SATB2Q9UPW6 733 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 MAU2Q9Y6X3 613 aa15.7■□□□□ 0.1
SHOX-201ENST00000334060 OR2W5A6NFC9 320 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 FOXS1O43638 330 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 OR2B3O76000 313 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 HRH2P25021 359 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 CERS1P27544 350 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 AHRP35869 848 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms