RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 DOC2BQ14184 412 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 CPTPQ5TA50 214 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 TRNT1Q96Q11 434 aaKnown RBP22.72■■□□□ 1.23
TSKU-201ENST00000333090 CNPPD1Q9BV87 410 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 SMURF1Q9HCE7 757 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 MBD1Q9UIS9 605 aaPredicted RBP22.72■■□□□ 1.23
TSKU-201ENST00000333090 C1orf226A1L170 272 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 J3KTA2 159 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 CAPN5O15484 640 aaPredicted RBP22.72■■□□□ 1.23
TSKU-201ENST00000333090 GPX5O75715 221 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 PCSK2P16519 638 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 CDKN3Q16667 212 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 ZMAT1Q5H9K5 638 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 MFSD14CQ5VZR4 134 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 PRSS55Q6UWB4 352 aaPredicted RBP22.72■■□□□ 1.23
TSKU-201ENST00000333090 BBS7Q8IWZ6 715 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 OR4C15Q8NGM1 316 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 FCRL1Q96LA6 429 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 DEPDC7Q96QD5 511 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 DYRK4Q9NR20 520 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 SCAMP2O15127 329 aaKnown RBP22.71■■□□□ 1.23
TSKU-201ENST00000333090 CD22P20273 847 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 DGKEP52429 567 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 B4GALNT1Q00973 533 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 HKDC1Q2TB90 917 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 ZNF648Q5T619 568 aaPredicted RBP22.71■■□□□ 1.23
TSKU-201ENST00000333090 FLCNQ8NFG4 579 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 C9orf43Q8TAL5 461 aaPredicted RBP22.71■■□□□ 1.23
TSKU-201ENST00000333090 WFDC5Q8TCV5 224 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 ASB11Q8WXH4 323 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 TCF25Q9BQ70 676 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 MUTYHQ9UIF7 546 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 RUVBL1Q9Y265 456 aaKnown RBP22.71■■□□□ 1.23
TSKU-201ENST00000333090 EFCAB10A6NFE3 127 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 H3BM21 787 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 TFECO14948 347 aaPredicted RBP22.71■■□□□ 1.23
TSKU-201ENST00000333090 SEPT4O43236 478 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 SEMA3DO95025 777 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 HNMTP50135 292 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 TEAD4Q15561 434 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 SSX1Q16384 188 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 CLPPQ16740 277 aaPredicted RBP22.71■■□□□ 1.23
TSKU-201ENST00000333090 IFI44LQ53G44 452 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 NPAS3Q8IXF0 933 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 VPS37AQ8NEZ2 397 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 ST6GAL2Q96JF0 529 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 SPATA9Q9BWV2 254 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 SH3BP4Q9P0V3 963 aa22.71■■□□□ 1.23
TSKU-201ENST00000333090 C8GP07360 202 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 ETFAP13804 333 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 PRKAR2AP13861 404 aaKnown RBP22.7■■□□□ 1.22
TSKU-201ENST00000333090 CDC42P60953 191 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 SMARCB1Q12824 385 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 PTGES3Q15185 160 aaKnown RBP22.7■■□□□ 1.22
TSKU-201ENST00000333090 ATP13A5Q4VNC0 1218 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 XKR6Q5GH73 641 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 RAB43Q86YS6 212 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 VANGL1Q8TAA9 524 aaPredicted RBP22.7■■□□□ 1.22
TSKU-201ENST00000333090 GPR151Q8TDV0 419 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 TTYH2Q9BSA4 534 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 ZDHHC3Q9NYG2 299 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 CDH18Q13634 790 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 COX20Q5RI15 118 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 GALNT12Q8IXK2 581 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 PHOX2BQ99453 314 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 CDCA4Q9BXL8 241 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 ASPNQ9BXN1 380 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 CORO2BQ9UQ03 480 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 GRIP1Q9Y3R0 1128 aa22.7■■□□□ 1.22
TSKU-201ENST00000333090 PRAMEF25A6NGN4 478 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 NPIPB15A6NHN6 443 aaPredicted RBP22.69■■□□□ 1.22
TSKU-201ENST00000333090 PCDH17O14917 1159 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 CD72P21854 359 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 OR4A15Q8NGL6 344 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 MCCC1Q96RQ3 725 aaPredicted RBP22.69■■□□□ 1.22
TSKU-201ENST00000333090 FAM129BQ96TA1 746 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 A0A075B6Q4 140 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 C2orf78A6NCI8 922 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 ADAM12O43184 909 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 PPIBP23284 216 aaKnown RBP22.69■■□□□ 1.22
TSKU-201ENST00000333090 POU1F1P28069 291 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 RPS19P39019 145 aaKnown RBP22.69■■□□□ 1.22
TSKU-201ENST00000333090 RFX2P48378 723 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 TEKQ02763 1124 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 TBRG1Q3YBR2 411 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 ADNP2Q6IQ32 1131 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 FUT10Q6P4F1 479 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 C19orf48Q6RUI8 117 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 ZNF852Q6ZMS4 543 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 RFLNAQ6ZTI6 216 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 PTCHD4Q6ZW05 846 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 C1orf52Q8N6N3 182 aaKnown RBP22.69■■□□□ 1.22
TSKU-201ENST00000333090 ASIC4Q96FT7 647 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 TMEM246Q9BRR3 403 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 TRAPPC4Q9Y296 219 aa22.69■■□□□ 1.22
TSKU-201ENST00000333090 CENPBD1B2RD01 187 aa22.68■■□□□ 1.22
TSKU-201ENST00000333090 ANXA4P09525 319 aaPredicted RBP22.68■■□□□ 1.22
TSKU-201ENST00000333090 HNF4AP41235 474 aa22.68■■□□□ 1.22
TSKU-201ENST00000333090 GANABQ14697 944 aaKnown RBP22.68■■□□□ 1.22
TSKU-201ENST00000333090 CDK10Q15131 360 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms