RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GPR26Q8NDV2 337 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SLC45A3Q96JT2 553 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 C20orf27Q9GZN8 174 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 PRSS21Q9Y6M0 314 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 LAMB2P55268 1798 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 DUXAA6NLW8 204 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 CDC123O75794 336 aaPredicted RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SNX4O95219 450 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 PRKAR1AP10644 381 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 JUPP14923 745 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 XKR4Q5GH76 650 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SAMD14Q8IZD0 417 aaPredicted RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 OR6K6Q8NGW6 343 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 TSEN15Q8WW01 171 aaKnown RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 NCSTNQ92542 709 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 GSDMCQ9BYG8 508 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 ACSL6Q9UKU0 697 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 POFUT2Q9Y2G5 429 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 ADAMTSL1Q8N6G6 1762 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 CAPN5O15484 640 aaPredicted RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 CFIP05156 583 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 ZNF24P17028 368 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 MLLT10P55197 1068 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 ELAVL3Q14576 367 aaKnown RBP12.55□□□□□ -0.4
VSTM4-202ENST00000332853 ENPP6Q6UWR7 440 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 RPTNQ6XPR3 784 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 WASH4PA8MWX3 477 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 SLC16A5O15375 505 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 OR12D1P0DN82 309 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 BNIP3Q12983 259 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 CLECL1Q8IZS7 167 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 APIPQ96GX9 242 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 COX4I2Q96KJ9 171 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 ZNF451Q9Y4E5 1061 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 CLCA3PQ9Y6N3 262 aa12.55□□□□□ -0.4
VSTM4-202ENST00000332853 A0A096LPI6 279 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 SOCS2O14508 198 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
VSTM4-202ENST00000332853 C1orf61Q13536 156 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TAZQ16635 292 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 SLC25A36Q96CQ1 311 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TRIM39Q9HCM9 518 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TMEM138Q9NPI0 162 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 MASP1P48740 699 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 ARSFP54793 590 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 ARF5P84085 180 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 PIGGQ5H8A4 983 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 PIGKQ92643 395 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 SLC46A2Q9BY10 475 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 WBP11Q9Y2W2 641 aaKnown RBP12.54□□□□□ -0.4
VSTM4-202ENST00000332853 SPIN1Q9Y657 262 aaPredicted RBP12.54□□□□□ -0.4
VSTM4-202ENST00000332853 FAM92AA1XBS5 289 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 FPR1P21462 350 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TIA1P31483 386 aaKnown RBP eCLIP12.54□□□□□ -0.4
VSTM4-202ENST00000332853 GRK6P43250 576 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 ACADVLP49748 655 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 RUNX3Q13761 415 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 OR8J3Q8NGG0 315 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 NKIRAS2Q9NYR9 191 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TMEM150CB9EJG8 249 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 KHNYNO15037 678 aaKnown RBP12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TLR1Q15399 786 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 OR5M3Q8NGP4 307 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 CNIH3Q8TBE1 160 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
VSTM4-202ENST00000332853 RTP3Q9BQQ7 232 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 NEUROD4Q9HD90 331 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 IL17CQ9P0M4 197 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 PCDHGA12O60330 932 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 GIMD1P0DJR0 217 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 ADRB3P13945 408 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 ZNF140P52738 457 aaPredicted RBP12.54□□□□□ -0.4
VSTM4-202ENST00000332853 LRIG1Q96JA1 1093 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 TRIB3Q96RU7 358 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 IL1RAPQ9NPH3 570 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 ACSL5Q9ULC5 683 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 RREB1Q92766 1687 aa12.54□□□□□ -0.4
VSTM4-202ENST00000332853 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 MUSKO15146 869 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 PSIP1O75475 530 aaKnown RBP12.53□□□□□ -0.4
VSTM4-202ENST00000332853 UBXN7O94888 489 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 CAPN3P20807 821 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 GRIN2CQ14957 1233 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
VSTM4-202ENST00000332853 PGBD5Q8N414 524 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 UFD1Q92890 307 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 TRNT1Q96Q11 434 aaKnown RBP12.53□□□□□ -0.4
VSTM4-202ENST00000332853 UCK2Q9BZX2 261 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 HHLA1C9JL84 531 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 ACVR2AP27037 513 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 CLCN7P51798 805 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 MS4A2Q01362 244 aa12.53□□□□□ -0.4
VSTM4-202ENST00000332853 ATP6AP1Q15904 470 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms