RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 IL17FQ96PD4 163 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 KRT12Q99456 494 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 NPAS2Q99743 824 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 IARS2Q9NSE4 1012 aaKnown RBP12.42□□□□□ -0.42
SYCN-201ENST00000318438 SPATA7Q9P0W8 599 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.42□□□□□ -0.42
SYCN-201ENST00000318438 GALPQ9UBC7 116 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 TRPC4Q9UBN4 977 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 CIDEBQ9UHD4 219 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 MKL2Q9ULH7 1088 aa12.42□□□□□ -0.42
SYCN-201ENST00000318438 IGHV3-20A0A0C4DH32 117 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 EFCAB8A8MWE9 144 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 TP73O15350 636 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 PSIP1O75475 530 aaKnown RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 SEC24DO94855 1032 aaPredicted RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 HAUS5O94927 633 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 SP1P08047 785 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 ERVK-10P10266 1014 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 ENO3P13929 434 aaPredicted RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 ARL4CP56559 192 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 OC90Q02509 493 aaPredicted RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 SF1Q15637 639 aaKnown RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 KLHL38Q2WGJ6 581 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 CCSMST1Q4G0I0 132 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 FRMPD2BQ6IN97 320 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 PRMT9Q6P2P2 845 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 KIAA0408Q6ZU52 694 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 GALNT7Q86SF2 657 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 TAX1BP1Q86VP1 789 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 CRLF3Q8IUI8 442 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 IGDCC3Q8IVU1 814 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 MYRIPQ8NFW9 859 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 ZNF354BQ96LW1 612 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 SLC30A3Q99726 388 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 WDR83Q9BRX9 315 aaKnown RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 AARSD1Q9BTE6 412 aaKnown RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 TUBB6Q9BUF5 446 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 TP63Q9H3D4 680 aaPredicted RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 PLAC1Q9HBJ0 212 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 DMRT3Q9NQL9 472 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 FAM114A2Q9NRY5 505 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 INTS7Q9NVH2 962 aaKnown RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 CRIM1Q9NZV1 1036 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 ZC3H7BQ9UGR2 993 aaKnown RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 TSR3Q9UJK0 312 aaKnown RBP12.41□□□□□ -0.42
SYCN-201ENST00000318438 CHMP2BQ9UQN3 213 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 TEX264Q9Y6I9 313 aa12.41□□□□□ -0.42
SYCN-201ENST00000318438 FAM187AA6NFU0 413 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 A6NNC1 897 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 ARHGEF33A8MVX0 844 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 TARM1B6A8C7 271 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 H7C1Q1 480 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 MYO1CO00159 1063 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 EIF3FO00303 357 aaPredicted RBP12.4□□□□□ -0.42
SYCN-201ENST00000318438 CDC40O60508 579 aaKnown RBP eCLIP12.4□□□□□ -0.42
SYCN-201ENST00000318438 SRPX2O60687 465 aaPredicted RBP12.4□□□□□ -0.42
SYCN-201ENST00000318438 CTSVO60911 334 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 VPS26AO75436 327 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 NEURL1O76050 574 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 CATP04040 527 aaKnown RBP12.4□□□□□ -0.42
SYCN-201ENST00000318438 ERGP11308 486 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 ELK3P41970 407 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 KIR2DL3P43628 341 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 RPL21P46778 160 aaKnown RBP12.4□□□□□ -0.42
SYCN-201ENST00000318438 NKX6-1P78426 367 aaPredicted RBP12.4□□□□□ -0.42
SYCN-201ENST00000318438 FRG1Q14331 258 aaKnown RBP12.4□□□□□ -0.42
SYCN-201ENST00000318438 MAPKAPK3Q16644 382 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 BTBD16Q32M84 506 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.4□□□□□ -0.42
SYCN-201ENST00000318438 STEAP4Q687X5 459 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 SLC25A25Q6KCM7 469 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 TMEM205Q6UW68 189 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 SYT10Q6XYQ8 523 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 MAATS1Q7Z4T9 603 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 BBOF1Q8ND07 529 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 CD200R1Q8TD46 325 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 ZUFSPQ96AP4 578 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 C10orf90Q96M02 699 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 GPR21Q99679 349 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 NEUROD4Q9HD90 331 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 DHRS7Q9Y394 339 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 CUBNO60494 3623 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 ANK2Q01484 3957 aa12.4□□□□□ -0.42
SYCN-201ENST00000318438 LOC105369274A0A096LPK9 316 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 LOC102723532A0A0G2JNH3 316 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 KRT87PA6NCN2 255 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 E7ESA3 106 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 SMAD7O15105 426 aaKnown RBP12.39□□□□□ -0.43
SYCN-201ENST00000318438 NRP2O60462 931 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 EIF2S1P05198 315 aaKnown RBP12.39□□□□□ -0.43
SYCN-201ENST00000318438 MPC1LP0DKB6 136 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 RFC3P40938 356 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 CBLBQ13191 982 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 CUL1Q13616 776 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 ARHGAP19Q14CB8 494 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 EMC4Q5J8M3 183 aa12.39□□□□□ -0.43
SYCN-201ENST00000318438 LRRC8EQ6NSJ5 796 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms