RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CFDP00746 253 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 APOC3P02656 99 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RPLP0P05388 317 aaKnown RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 NDUFB7P17568 137 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ARF4P18085 180 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 VEGFCP49767 419 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ATP12AP54707 1039 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RAB4BP61018 213 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 IFRD2Q12894 506 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF79Q15937 498 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 OR2B11Q5JQS5 317 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 DLEU7Q6UYE1 221 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 TNS4Q8IZW8 715 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 STX19Q8N4C7 294 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 METTL6Q8TCB7 284 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 NR4A3Q92570 626 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 TMBIM1Q969X1 311 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 MFSD3Q96ES6 412 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 NARS2Q96I59 477 aaKnown RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 RNF145Q96MT1 663 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 MCCC1Q96RQ3 725 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 NEU1Q99519 415 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 KCNS3Q9BQ31 491 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CRB3Q9BUF7 120 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CPEB1Q9BZB8 566 aaKnown RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 CARS2Q9HA77 564 aaKnown RBP6.42□□□□□ -1.38
ZNF540-201ENST00000316433 SCN3BQ9NY72 215 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 PTTG3PQ9NZH4 202 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 ZMIZ1Q9ULJ6 1067 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 MED16Q9Y2X0 877 aa6.42□□□□□ -1.38
ZNF540-201ENST00000316433 IGLV3-10A0A075B6K4 115 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 LOC100506127A0A0U1RQW1 187 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 LOC100130705A0A1B0GUX0 176 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 POM121BA6NF01 834 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 HAS3O00219 553 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CDC7O00311 574 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 UPK1AO00322 258 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 DLX3O60479 287 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CXCL14O95715 111 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 IQCF3P0C7M6 154 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 RAC2P15153 192 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 FDXRP22570 491 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 LAP3P28838 519 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 GRIA4P48058 902 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ACTR1AP61163 376 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 DYNLT1P63172 113 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 IL5RAQ01344 420 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 C2orf80Q0P641 193 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PRKG2Q13237 762 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TTLL4Q14679 1199 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SOWAHAQ2M3V2 549 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 NOMO2Q5JPE7 1267 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 C9orf152Q5JTZ5 239 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 MLIPQ5VWP3 458 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CNSTQ6PJW8 725 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ABI3BPQ7Z7G0 1075 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TMEM132CQ8N3T6 1108 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 LRRC17Q8N6Y2 441 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 OR52K2Q8NGK3 314 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 AKR7LQ8NHP1 331 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CA5BP1Q8WTZ4 195 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 LURAP1Q96LR2 239 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF599Q96NL3 588 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 QRFPRQ96P65 431 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 NTMT1Q9BV86 223 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 GSTO2Q9H4Y5 243 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 C11orf49Q9H6J7 331 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 AGO3Q9H9G7 860 aaKnown RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 C3orf14Q9HBI5 128 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZFP64Q9NPA5 681 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 IL1RAPQ9NPH3 570 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 HEBP1Q9NRV9 189 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ABCB8Q9NUT2 735 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF358Q9NW07 568 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 NDUFAF4Q9P032 175 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 MAGED1Q9Y5V3 778 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 A0A075B6Q4 140 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 A8MVJ9 347 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 FPGTO14772 594 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 MATN3O15232 486 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PPM1DO15297 605 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PROM1O43490 865 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 GPR32O75388 356 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SERPINF2P08697 491 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 FGF2P09038 288 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZDHHC11BP0C7U3 371 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 CD19P15391 556 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ARSBP15848 533 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TIMP2P16035 220 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TMEM11P17152 192 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 TPH1P17752 444 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 NFKB1P19838 968 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 PSMB4P28070 264 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 FMO3P31513 532 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 BAG6P46379 1132 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 KCNJ3P48549 501 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF81P51508 661 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 DAOAP59103 153 aa6.41□□□□□ -1.38
ZNF540-201ENST00000316433 SNTB1Q13884 538 aaKnown RBP6.41□□□□□ -1.38
ZNF540-201ENST00000316433 RCAN2Q14206 197 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms