RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 NME5P56597 212 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 FKBP3Q00688 224 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 DLG1Q12959 904 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TNK1Q13470 666 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TXNRD3NBQ6F5E7 133 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 DPY19L2P1Q6NXN4 242 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 PODNL1Q6PEZ8 512 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ENPP7Q6UWV6 458 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF704Q6ZNC4 412 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 C15orf39Q6ZRI6 1047 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 NIPA1Q7RTP0 329 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 PIWIL4Q7Z3Z4 852 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TIGD4Q8IY51 512 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 BMPERQ8N8U9 685 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 NPEPL1Q8NDH3 523 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF397Q8NF99 534 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 OR11H4Q8NGC9 324 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 LRRC15Q8TF66 581 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 RIT1Q92963 219 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 DCPSQ96C86 337 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 RIT2Q99578 217 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TEKT3Q9BXF9 490 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SEZ6LQ9BYH1 1024 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 VN1R1Q9GZP7 353 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 RPAP3Q9H6T3 665 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 GAREM1Q9H706 876 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TMEM206Q9H813 350 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SLC38A10Q9HBR0 1119 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CDH20Q9HBT6 801 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SERINC1Q9NRX5 453 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ZNHIT6Q9NWK9 470 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ADPRHL2Q9NX46 363 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 HOXC10Q9NYD6 342 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SMARCAL1Q9NZC9 954 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ZHX2Q9Y6X8 837 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 BRCA1P38398 1863 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 UQCRHLA0A096LP55 91 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CLEC18AA5D8T8 446 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 DYNC1I1O14576 645 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SLITRK3O94933 977 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 UQCRHP07919 91 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 GAP43P17677 238 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 GM2AP17900 193 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ARCN1P48444 511 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SLC12A3P55017 1021 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 FOLH1Q04609 750 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CUL3Q13618 768 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 GTF2H2Q13888 395 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CA9Q16790 459 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CCDC92Q53HC0 331 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ODF2Q5BJF6 829 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 MDH1BQ5I0G3 518 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 GTF2H2CQ6P1K8 395 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CYB5D1Q6P9G0 228 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 STXBP4Q6ZWJ1 553 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 COMMD2Q86X83 199 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 C10orf53Q8N6V4 93 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 L3MBTL4Q8NA19 623 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 THAP8Q8NA92 274 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CLEC18CQ8NCF0 446 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 KIAA0895Q8NCT3 520 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 OR7G3Q8NG95 312 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 OR8K1Q8NGG5 319 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 C9orf43Q8TAL5 461 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 MAGEC3Q8TD91 643 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 DNAJC19Q96DA6 116 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 CNOT6LQ96LI5 555 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 C12orf42Q96LP6 360 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 HNRNPABQ99729 332 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 HSD17B14Q9BPX1 270 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 TRAF4Q9BUZ4 470 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 SLC5A7Q9GZV3 580 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 S1PR5Q9H228 398 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 ARRDC1-AS1Q9H2J1 176 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 RAVER2Q9HCJ3 691 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 KLHL1Q9NR64 748 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 P4HTMQ9NXG6 502 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 AKAP7Q9P0M2 348 aaPredicted RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 DAPK2Q9UIK4 370 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 WDR83OSQ9Y284 106 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 HBS1LQ9Y450 684 aaKnown RBP3.77□□□□□ -1.81
SMCO3-201ENST00000316048 MYH7BA7E2Y1 1941 aa3.77□□□□□ -1.81
SMCO3-201ENST00000316048 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 OOEPA6NGQ2 149 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 DUXAA6NLW8 204 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 USP27XA6NNY8 438 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 SLC30A4O14863 429 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CETN3O15182 167 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CHMP2AO43633 222 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CALUO43852 315 aaPredicted RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 KERAO60938 352 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 GLUD1P00367 558 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 TFAP2AP05549 437 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 INHBAP08476 426 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CDH1P12830 882 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 NF2P35240 595 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 EPS15P42566 896 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 NKX2-1P43699 371 aaPredicted RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 GLUD2P49448 558 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 RGS7P49802 495 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms