RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 A0A1W2PQU0 124 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3FA6NER0 549 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 TTC36A6NLP5 189 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3LB9A6J9 549 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 DEAF1O75398 565 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 EPN2O95208 641 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 SERPIND1P05546 499 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3HP0C7X1 549 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TIA1P31483 386 aaKnown RBP eCLIP11.92□□□□□ -0.55e-7■■■■□ 23.6
RNF4-201ENST00000314289 BMXP51813 675 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TAS2R50P59544 299 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 CAMK2GQ13555 558 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 CYBRD1Q53TN4 286 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.92□□□□□ -0.5
RNF4-201ENST00000314289 ATG9BQ674R7 924 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3GQ6DHY5 549 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3CQ6IPX1 549 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 ABRAXAS1Q6UWZ7 409 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 ADCK2Q7Z695 626 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 PDZD3Q86UT5 571 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D3Q8IZP1 549 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 GOLM1Q8NBJ4 401 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 RAD51AP1Q96B01 352 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 MRPL38Q96DV4 380 aaKnown RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 ZNF514Q96K75 400 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 CCDC115Q96NT0 180 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TPT1P8Q9HAU6 139 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 DMRT3Q9NQL9 472 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 DCAF13Q9NV06 445 aaKnown RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 DZANK1Q9NVP4 752 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 CLDND1Q9NY35 253 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 CORINQ9Y5Q5 1042 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 E2F6O75461 281 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 SERPINB7O75635 380 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 IDSP22304 550 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 BCAP31P51572 246 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 IL1RL1Q01638 556 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 MTAPQ13126 283 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 PRSS53Q2L4Q9 553 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 SLC36A3Q495N2 470 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 TMEM196Q5HYL7 178 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 GALNT18Q6P9A2 607 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 RD3Q7Z3Z2 195 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 CALHM3Q86XJ0 350 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 MFSD2AQ8NA29 543 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 LINC00615Q96LM1 132 aaPredicted RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 BARD1Q99728 777 aaKnown RBP11.92□□□□□ -0.5
RNF4-201ENST00000314289 UGT2B28Q9BY64 529 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 ABCG4Q9H172 646 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 DPEP2Q9H4A9 486 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 OBP2AQ9NY56 170 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 ZNF232Q9UNY5 417 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 NINQ8N4C6 2090 aa11.92□□□□□ -0.5
RNF4-201ENST00000314289 C17orf113A0A1B0GUU1 675 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 G3V2T6 193 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 PPM1DO15297 605 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 KCNK5O95279 499 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 COL9A1P20849 921 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 KIR2DL1P43626 348 aaPredicted RBP11.91□□□□□ -0.5
RNF4-201ENST00000314289 ARSFP54793 590 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 CLDN2P57739 230 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 TFF2Q03403 129 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 SRSF11Q05519 484 aaKnown RBP11.91□□□□□ -0.5
RNF4-201ENST00000314289 C2orf80Q0P641 193 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 SGCGQ13326 291 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 ITGADQ13349 1161 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 CYP27C1Q4G0S4 372 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 TMIGD1Q6UXZ0 262 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 VN1R5Q7Z5H4 357 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 SLC15A4Q8N697 577 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 TANKQ92844 425 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 TPD52L3Q96J77 140 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 C12orf66Q96MD2 445 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 F2RL3Q96RI0 385 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 FERD3LQ96RJ6 166 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 BRF2Q9HAW0 419 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 EXD2Q9NVH0 621 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 FZD4Q9ULV1 537 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 GPSM3Q9Y4H4 160 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 TRBV23OR9-2A0A075B6M9 112 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.91□□□□□ -0.5
RNF4-201ENST00000314289 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.91□□□□□ -0.5
RNF4-201ENST00000314289 FAM220BPB1ANY3 271 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 H0Y8X5 98 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 C6orf47O95873 294 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 SLC35G4P0C7Q5 338 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 ACPPP15309 386 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 NR4A1P22736 598 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 DCKP27707 260 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 POLR2IP36954 125 aaKnown RBP11.91□□□□□ -0.5
RNF4-201ENST00000314289 PHEXP78562 749 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 CD300CQ08708 224 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 HIST2H2ACQ16777 129 aaPredicted RBP11.91□□□□□ -0.5
RNF4-201ENST00000314289 IRAK1BP1Q5VVH5 260 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 HIST2H2AA3Q6FI13 130 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 ADAMTSL4Q6UY14 1074 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 ZDHHC13Q8IUH4 622 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 BPIFB6Q8NFQ5 453 aa11.91□□□□□ -0.5
RNF4-201ENST00000314289 OR4A15Q8NGL6 344 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms