RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 PADI4Q9UM07 663 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 DNAH14Q0VDD8 3507 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 IL3P08700 152 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 TPP2P29144 1249 aaPredicted RBP23.06■■□□□ 1.28
RFWD2-201ENST00000308769 CCR8P51685 355 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 RGNQ15493 299 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.06■■□□□ 1.28
RFWD2-201ENST00000308769 TMEM179BQ7Z7N9 219 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 SYNPOQ8N3V7 929 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 ABHD11Q8NFV4 315 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 RHBGQ9H310 441 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 SMURF2Q9HAU4 748 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 ATAD3AQ9NVI7 634 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 SPASTQ9UBP0 616 aa23.06■■□□□ 1.28
RFWD2-201ENST00000308769 ZNF282Q9UDV7 671 aaPredicted RBP23.06■■□□□ 1.28
RFWD2-201ENST00000308769 RTCAO00442 366 aaKnown RBP23.05■■□□□ 1.28
RFWD2-201ENST00000308769 PEX19P40855 299 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 CASP9P55211 416 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ADARB1P78563 741 aaKnown RBP23.05■■□□□ 1.28
RFWD2-201ENST00000308769 TTC33Q6PID6 262 aaPredicted RBP23.05■■□□□ 1.28
RFWD2-201ENST00000308769 SPESP1Q6UW49 350 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 R3HCC1LQ7Z5L2 792 aaKnown RBP23.05■■□□□ 1.28
RFWD2-201ENST00000308769 EID3Q8N140 333 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ZNF786Q8N393 782 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 MAL2Q969L2 176 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 SDCCAG3Q96C92 435 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 MSLNLQ96KJ4 702 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 CAMK1GQ96NX5 476 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 TSC22D3Q99576 134 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 C1QTNF7Q9BXJ2 289 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ZNF717Q9BY31 904 aaPredicted RBP23.05■■□□□ 1.28
RFWD2-201ENST00000308769 PCBD2Q9H0N5 130 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 U3KQV3 271 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 PRUNE2Q8WUY3 3088 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ALBP02768 609 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 KDELR2P33947 212 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 REEP5Q00765 189 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 CNPY1Q3B7I2 92 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 KHDRBS2Q5VWX1 349 aaKnown RBP23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ANKRD34AQ69YU3 496 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ANGPTL8Q6UXH0 198 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ZDHHC21Q8IVQ6 265 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 ADHFE1Q8IWW8 467 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 PGBD3Q8N328 593 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 SIPA1Q96FS4 1042 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 F2RL3Q96RI0 385 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 MS4A8Q9BY19 250 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 RMI1Q9H9A7 625 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 CLK4Q9HAZ1 481 aaKnown RBP23.05■■□□□ 1.28
RFWD2-201ENST00000308769 FGF22Q9HCT0 170 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 PIAS3Q9Y6X2 628 aa23.05■■□□□ 1.28
RFWD2-201ENST00000308769 PRAMEF33A0A0G2JMD5 474 aa23.04■■□□□ 1.28
RFWD2-201ENST00000308769 NOBOXO60393 691 aa23.04■■□□□ 1.28
RFWD2-201ENST00000308769 MAGEA2P43356 314 aa23.04■■□□□ 1.28
RFWD2-201ENST00000308769 CDH15P55291 814 aa23.04■■□□□ 1.28
RFWD2-201ENST00000308769 FAM180BQ6P0A1 224 aa23.04■■□□□ 1.28
RFWD2-201ENST00000308769 VTCN1Q7Z7D3 282 aa23.04■■□□□ 1.28
RFWD2-201ENST00000308769 GPATCH2Q9NW75 528 aa23.04■■□□□ 1.28
RFWD2-201ENST00000308769 SMIM31A0A1B0GVY4 71 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 POM121BA6NF01 834 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PRR19A6NJB7 356 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PDZK1P1A8MUH7 402 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 CACNB4O00305 520 aaPredicted RBP23.03■■□□□ 1.28
RFWD2-201ENST00000308769 THRBP10828 461 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PPIBP23284 216 aaKnown RBP23.03■■□□□ 1.28
RFWD2-201ENST00000308769 CLDN2P57739 230 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 LRRC74AQ0VAA2 488 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.03■■□□□ 1.28
RFWD2-201ENST00000308769 DEPDC1Q5TB30 811 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 USP51Q70EK9 711 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PLD3Q8IV08 490 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 NAGSQ8N159 534 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 GOT1L1Q8NHS2 421 aaPredicted RBP23.03■■□□□ 1.28
RFWD2-201ENST00000308769 FBRSQ9HAH7 460 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PREBQ9HCU5 417 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PRDM8Q9NQV8 689 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 RAPGEFL1Q9UHV5 662 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 ACSL6Q9UKU0 697 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 ABCG2Q9UNQ0 655 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 CORO2BQ9UQ03 480 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 GMEB1Q9Y692 573 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 CXCR2P25025 360 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 RPL3P39023 403 aaKnown RBP23.03■■□□□ 1.28
RFWD2-201ENST00000308769 DCTP40126 519 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 RAB28P51157 221 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 MVDP53602 400 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PPP2R2BQ00005 443 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PLCL1Q15111 1095 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 TCEA2Q15560 299 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 COX20Q5RI15 118 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 CCNYL2Q5T2Q4 361 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 PATL1Q86TB9 770 aaKnown RBP23.03■■□□□ 1.28
RFWD2-201ENST00000308769 SVOPLQ8N434 492 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 RAB42Q8N4Z0 105 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 SMRP1Q8NCR6 262 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 POP5Q969H6 163 aaKnown RBP23.03■■□□□ 1.28
RFWD2-201ENST00000308769 SLC35A5Q9BS91 424 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 OSBPL10Q9BXB5 764 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 EPB41L1Q9H4G0 881 aa23.03■■□□□ 1.28
RFWD2-201ENST00000308769 VNN3Q9NY84 501 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms