RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 BRD7Q9NPI1 651 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 TEX264Q9Y6I9 313 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 AFF3P51826 1226 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 OLR1P78380 273 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 POU6F2P78424 691 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 GRIN2CQ14957 1233 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 TDRPQ86YL5 185 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 CHST4Q8NCG5 386 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 PLEKHG4BQ96PX9 1271 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 SH3GL3Q99963 347 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 G6PC3Q9BUM1 346 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 SH3BGRL2Q9UJC5 107 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 CCL26Q9Y258 94 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 PTRH2Q9Y3E5 179 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 A8MVJ9 347 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 STX16-NPEPL1H3BU86 382 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 STX16O14662 325 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 SLC16A5O15375 505 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 RNF13O43567 381 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 SERPINA3P01011 423 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 IRS1P35568 1242 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 ARSFP54793 590 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 RPS3AP61247 264 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 ASTE1Q2TB18 679 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 KLHL26Q53HC5 615 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 TCTE1Q5JU00 501 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 NAIF1Q69YI7 327 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 RPS27LQ71UM5 84 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 TRIM73Q86UV7 250 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 CAPSLQ8WWF8 208 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 NMUR2Q9GZQ4 415 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 HPF1Q9NWY4 346 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 MARK1Q9P0L2 795 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 LRIT1Q9P2V4 623 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 CIB4A0PJX0 185 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 PRSS38A1L453 326 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF487B1APH4 448 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 SCELO95171 688 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 PYDC2Q56P42 97 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 CPXM2Q8N436 756 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 ROPN1LQ96C74 230 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 GPR22Q99680 433 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 DCUN1D5Q9BTE7 237 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 BCKDKO14874 412 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 CSNK1EP49674 416 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 OR2B6P58173 313 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 MAPK11Q15759 364 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 PARM1Q6UWI2 310 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 GPR149Q86SP6 731 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 SYVN1Q86TM6 617 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 LMO3Q8TAP4 145 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 IRF2BPLQ9H1B7 796 aa10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 OAS3Q9Y6K5 1087 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-201ENST00000307142 PRODHO43272 600 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SMAD6O43541 496 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 BRINP1O60477 761 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ENTPD5O75356 428 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PRKAR1AP10644 381 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 RORAP35398 523 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 CACNA2D1P54289 1103 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 BTBD16Q32M84 506 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 NANOGNBQ7Z5D8 188 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM151BQ8IW70 566 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 BANPQ8N9N5 519 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 DOK4Q8TEW6 326 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 EHD3Q9NZN3 535 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 A0A075B6Q4 140 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TCEA3O75764 348 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF20P17024 532 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF763Q0D2J5 394 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SLC10A2Q12908 348 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TRIM61Q5EBN2 209 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM198Q66K66 360 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 CAND1Q86VP6 1230 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZC3H3Q8IXZ2 948 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF100Q8IYN0 542 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 DNAJB8Q8NHS0 232 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 CAMK1GQ96NX5 476 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 KCNA7Q96RP8 456 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PALMDQ9NP74 551 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 GALNTL5Q7Z4T8 443 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PGAM4Q8N0Y7 254 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ANKFN1Q8N957 763 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 GSTCDQ8NEC7 633 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 C1GALT1C1Q96EU7 318 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SCRN2Q96FV2 425 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 MSANTD3Q96H12 275 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF184Q99676 751 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 LGALS13Q9UHV8 139 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZBTB11O95625 1053 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PSAPL1Q6NUJ1 521 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PNCKQ6P2M8 343 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 GPR65Q8IYL9 337 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 UBASH3BQ8TF42 649 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 CRB3Q9BUF7 120 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 HSD3B7Q9H2F3 369 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms