RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CEP97Q8IW35 865 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 TOR1AIP2Q8NFQ8 470 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 IL4I1Q96RQ9 567 aa7.41□□□□□ -1.22
SF3B3-201ENST00000302516 WRAP53Q9BUR4 548 aaKnown RBP7.41□□□□□ -1.22
SF3B3-201ENST00000302516 SLC38A8A6NNN8 435 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 TYROBPO43914 113 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 OAZ2O95190 189 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 VNN1O95497 513 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ADH6P28332 368 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ERVK-21P61565 698 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 GSTM4Q03013 218 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 DECR1Q16698 335 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 SFT2D3Q587I9 215 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 LIPJQ5W064 366 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 LPIN3Q9BQK8 851 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 TBL1XR1Q9BZK7 514 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 EVLQ9UI08 416 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 UTS2RQ9UKP6 389 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 SCML2Q9UQR0 700 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 A0A1B0GVI7 797 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 PHYHO14832 338 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 CREBL2O60519 120 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 FOSL2P15408 326 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 RPL10P27635 214 aaKnown RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ACTR1BP42025 376 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 KLF1Q13351 362 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF598Q86UK7 904 aaKnown RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 FBXL20Q96IG2 436 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 TREHO43280 583 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 RNASEH2AO75792 299 aaKnown RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 RHCEP18577 417 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 HRH2P25021 359 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 AIMP2Q13155 320 aaKnown RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 GNMTQ14749 295 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ABRAXAS2Q15018 415 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 RAB41Q5JT25 222 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 CLEC20AQ6ZU45 233 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 NEIL3Q8TAT5 605 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 COPS5Q92905 334 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ADAD1Q96M93 576 aaKnown RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 AP1S3Q96PC3 154 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 KCNH6Q9H252 994 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 KLHL21Q9UJP4 597 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 AGAP5A6NIR3 686 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ZSCAN5BA6NJL1 495 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 PSMD9O00233 223 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 XPNPEP2O43895 674 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 AOC2O75106 756 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 RFPL1O75677 317 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 SLC6A9P48067 706 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 RGS19P49795 217 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 HERV-K104P61576 105 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 INCA1Q0VD86 236 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 PAQR3Q6TCH7 311 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 C12orf40Q86WS4 652 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 CARM1Q86X55 608 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 PHTF2Q8N3S3 785 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 DCBLD1Q8N8Z6 715 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 KCNJ9Q92806 393 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 CCSER2Q9H7U1 834 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ZCCHC3Q9NUD5 404 aaKnown RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 NLE1Q9NVX2 485 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-201ENST00000302516 OSER1Q9NX31 292 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ADM5C9JUS6 153 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 C9JVG2 144 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 H3BUI4 141 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 M0R129 80 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 BCHEP06276 602 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 MINDY1Q8N5J2 469 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF709Q8N972 641 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 HYLS1Q96M11 299 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 DGAT2Q96PD7 388 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 RANBP9Q96S59 729 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 DOHHQ9BU89 302 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 MRI1Q9BV20 369 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 ENY2Q9NPA8 101 aa7.4□□□□□ -1.22
SF3B3-201ENST00000302516 NDUFS4O43181 175 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 CKMT2P17540 419 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 HLCSP50747 726 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 HNRNPFP52597 415 aaKnown RBP7.4□□□□□ -1.23
SF3B3-201ENST00000302516 OR12D2P58182 307 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 PLEKHS1Q5SXH7 462 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 UBE2J2Q8N2K1 259 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 LSM14AQ8ND56 463 aaKnown RBP7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ORAI3Q9BRQ5 295 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 CD244Q9BZW8 370 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ACSS2Q9NR19 701 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 CDC14AQ9UNH5 594 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 EDDM13A0A1B0GTR0 161 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 HTR3EA5X5Y0 456 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 SOCS5O75159 536 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 MAP2K3P46734 347 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 CAP1Q01518 475 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 GAD2Q05329 585 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ST3GAL4Q11206 333 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 FAM198BQ6UWH4 519 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 SLC29A4Q7RTT9 530 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ARL14Q8N4G2 192 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 METTL25Q8N6Q8 603 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 SAMD12Q8N8I0 201 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms