RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 FZD2Q14332 565 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 ZNF542PQ5EBM4 170 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 CCNYL2Q5T2Q4 361 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 KIAA1614Q5VZ46 1190 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 TNIP2Q8NFZ5 429 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 FIG4Q92562 907 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 PPWD1Q96BP3 646 aaKnown RBP21.31■■□□□ 1
SMAD1-201ENST00000302085 PHF12Q96QT6 1004 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 DPH7Q9BTV6 452 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 BHLHE41Q9C0J9 482 aaPredicted RBP21.31■■□□□ 1
SMAD1-201ENST00000302085 LHX9Q9NQ69 397 aa21.31■■□□□ 1
SMAD1-201ENST00000302085 NUP214P35658 2090 aaPredicted RBP21.31■■□□□ 1
SMAD1-201ENST00000302085 SPTY2D1-AS1A0A0U1RR47 76 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 ISM1B1AKI9 464 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 CLIC1O00299 241 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 BTN3A3O00478 584 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 THEGLP0DJG4 465 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 POLE2P56282 527 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 ILF3Q12906 894 aaKnown RBP eCLIP21.3■■□□□ 1
SMAD1-201ENST00000302085 IYDQ6PHW0 289 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 R3HCC1LQ7Z5L2 792 aaKnown RBP21.3■■□□□ 1
SMAD1-201ENST00000302085 ADGRF3Q8IZF5 1079 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 CATSPER1Q8NEC5 780 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 VPS37AQ8NEZ2 397 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 AICDAQ9GZX7 198 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 FBXL21Q9UKT6 434 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 KLHL20Q9Y2M5 609 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 PLXND1Q9Y4D7 1925 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 RNASET2O00584 256 aaKnown RBP21.3■■□□□ 1
SMAD1-201ENST00000302085 HAT1O14929 419 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 CLEC3AO75596 197 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 IL3P08700 152 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 BMP2P12643 396 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 HOXB3P14651 431 aaPredicted RBP21.3■■□□□ 1
SMAD1-201ENST00000302085 ZIC1Q15915 447 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 MPEG1Q2M385 716 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 MTX3Q5HYI7 312 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 MMP21Q8N119 569 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 SRMSQ9H3Y6 488 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 SPASTQ9UBP0 616 aa21.3■■□□□ 1
SMAD1-201ENST00000302085 CXCR6O00574 342 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 NDUFS4O43181 175 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 GMNNO75496 209 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 SCELO95171 688 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 CMPK1P30085 196 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 NUDT1P36639 197 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 PXNP49023 591 aaPredicted RBP21.29■■□□□ 1
SMAD1-201ENST00000302085 ABHD18Q0P651 414 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 PRRT3Q5FWE3 981 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 IKBIPQ70UQ0 350 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 RGMAQ96B86 450 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 PPCDCQ96CD2 204 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 CENPKQ9BS16 269 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 AGPAT4Q9NRZ5 378 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 V9GYQ6 96 aa21.29■■□□□ 1
SMAD1-201ENST00000302085 EVPLLA8MZ36 301 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 TPST1O60507 370 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 EPN2O95208 641 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 CCNDBP1O95273 360 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 CELA2BP08218 269 aaPredicted RBP21.28■■□□□ 1
SMAD1-201ENST00000302085 ZCCHC18P0CG32 403 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 GPX2P18283 190 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 RPL3P39023 403 aaKnown RBP21.28■■□□□ 1
SMAD1-201ENST00000302085 PUS10Q3MIT2 529 aaKnown RBP21.28■■□□□ 1
SMAD1-201ENST00000302085 ZNF425Q6IV72 752 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 SIX5Q8N196 739 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 DEFB119Q8N690 84 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 ANKFN1Q8N957 763 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 ICA1LQ8NDH6 482 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 CIDECQ96AQ7 238 aaPredicted RBP21.28■■□□□ 1
SMAD1-201ENST00000302085 TM4SF18Q96CE8 201 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 MTERF3Q96E29 417 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 SHDQ96IW2 340 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 SEPHS2Q99611 448 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 COQ10BQ9H8M1 238 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 ATAD3AQ9NVI7 634 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 TAAR2Q9P1P5 351 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 FANCMQ8IYD8 2048 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 C1orf226A1L170 272 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 AXIN1O15169 862 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 CAPN5O15484 640 aaPredicted RBP21.28■■□□□ 1
SMAD1-201ENST00000302085 SERPIND1P05546 499 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 ZNF26P17031 533 aaPredicted RBP21.28■■□□□ 1
SMAD1-201ENST00000302085 GRK3P35626 688 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 GPR155Q7Z3F1 870 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 TTLQ8NG68 377 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 PATE1Q8WXA2 126 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 EME1Q96AY2 570 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 KLHDC7BQ96G42 594 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 REXO5Q96IC2 774 aaKnown RBP21.28■■□□□ 1
SMAD1-201ENST00000302085 SLC6A18Q96N87 628 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 SARGQ9BW04 601 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 TWSG1Q9GZX9 223 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 KLHL31Q9H511 634 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 SNX7Q9UNH6 387 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 AK5Q9Y6K8 562 aa21.28■■□□□ 1
SMAD1-201ENST00000302085 FAM149AA5PLN7 773 aa21.27■■□□□ 1
SMAD1-201ENST00000302085 LRIT2A6NDA9 550 aa21.27■■□□□ 1
SMAD1-201ENST00000302085 STATHP02808 62 aa21.27■■□□□ 1
SMAD1-201ENST00000302085 FASP25445 335 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms