RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 EXT1Q16394 746 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 H3F3CQ6NXT2 135 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 CAPN12Q6ZSI9 719 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 C3orf62Q6ZUJ4 267 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 FRA10AC1Q70Z53 315 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 OR5T3Q8NGG3 340 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 M1APQ8TC57 530 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 TBC1D20Q96BZ9 403 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 MAGEB10Q96LZ2 347 aaPredicted RBP17.19■□□□□ 0.34
TMEM88-201ENST00000301599 CAPS2Q9BXY5 557 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 DERL2Q9GZP9 239 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 SPNS1Q9H2V7 528 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 KCNK13Q9HB14 408 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 SMYD2Q9NRG4 433 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 LANCL2Q9NS86 450 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 OLAHQ9NV23 265 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 MTO1Q9Y2Z2 717 aaKnown RBP17.19■□□□□ 0.34
TMEM88-201ENST00000301599 SCN3AQ9NY46 2000 aa17.19■□□□□ 0.34
TMEM88-201ENST00000301599 SPTAN1Q13813 2472 aaKnown RBP17.19■□□□□ 0.34
TMEM88-201ENST00000301599 RAD51CO43502 376 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 F10P00742 488 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 LDLRP01130 860 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 GSTA2P09210 222 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 ZNF888P0CJ79 500 aaPredicted RBP17.18■□□□□ 0.34
TMEM88-201ENST00000301599 GNAZP19086 355 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 JAK1P23458 1154 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 REEP5Q00765 189 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 RHAGQ02094 409 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 USP10Q14694 798 aaKnown RBP17.18■□□□□ 0.34
TMEM88-201ENST00000301599 ABRAXAS2Q15018 415 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 TSNQ15631 228 aaKnown RBP17.18■□□□□ 0.34
TMEM88-201ENST00000301599 INAQ16352 499 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 SFT2D3Q587I9 215 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 AMER2Q8N7J2 671 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 ANKRD53Q8N9V6 530 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 UTP15Q8TED0 518 aaKnown RBP17.18■□□□□ 0.34
TMEM88-201ENST00000301599 LPAR4Q99677 370 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 CPNE1Q99829 537 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 OSGIN2Q9Y236 505 aa17.18■□□□□ 0.34
TMEM88-201ENST00000301599 UTP11Q9Y3A2 253 aaKnown RBP17.18■□□□□ 0.34
TMEM88-201ENST00000301599 SPTBN1Q01082 2364 aaKnown RBP17.18■□□□□ 0.34
TMEM88-201ENST00000301599 ICE1Q9Y2F5 2266 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 OR5H15A6NDH6 313 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 DNAJB6O75190 326 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 UTP20O75691 2785 aaKnown RBP17.17■□□□□ 0.34
TMEM88-201ENST00000301599 CDC123O75794 336 aaPredicted RBP17.17■□□□□ 0.34
TMEM88-201ENST00000301599 PIAS1O75925 651 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 SERPINA6P08185 405 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 RNF224P0DH78 156 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 C1GALT1C1LP0DN25 315 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 HNF4AP41235 474 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 OR4D2P58180 307 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 CAV1Q03135 178 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 ACER2Q5QJU3 275 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 PAPD4Q6PIY7 484 aaKnown RBP17.17■□□□□ 0.34
TMEM88-201ENST00000301599 TMPRSS11BQ86T26 416 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 KLHDC8AQ8IYD2 350 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 DNAJB8Q8NHS0 232 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 RHBDF1Q96CC6 855 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 SLX1AQ9BQ83 275 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 SLC6A16Q9GZN6 736 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 MMP25Q9NPA2 562 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 HIVEP3Q5T1R4 2406 aa17.17■□□□□ 0.34
TMEM88-201ENST00000301599 POLEQ07864 2286 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 CXorf49A8MYA2 514 aaPredicted RBP17.16■□□□□ 0.34
TMEM88-201ENST00000301599 E2F3O00716 465 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 PRMT3O60678 531 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 PRAMEF2O60811 474 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 B4GALT2O60909 372 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 WDR47O94967 919 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 B3GALT4O96024 378 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 CRYABP02511 175 aaKnown RBP17.16■□□□□ 0.34
TMEM88-201ENST00000301599 CCDC166P0CW27 439 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 SMIM10L1P0DMW3 83 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 GDF5P43026 501 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 PLTPP55058 493 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 RAB8AP61006 207 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 OLR1P78380 273 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 TGFBIQ15582 683 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 MEP1AQ16819 746 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 CDKL4Q5MAI5 379 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 ZNF324BQ6AW86 544 aaPredicted RBP17.16■□□□□ 0.34
TMEM88-201ENST00000301599 SYT10Q6XYQ8 523 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 SLCO4C1Q6ZQN7 724 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 GPSM1Q86YR5 675 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 TCAIMQ8N3R3 496 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 TTLQ8NG68 377 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 CREB3L4Q8TEY5 395 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 SMIM10Q96HG1 83 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 PTCHD1Q96NR3 888 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 TAAR6Q96RI8 345 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 RBCK1Q9BYM8 510 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 KLHL31Q9H511 634 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 CAB39LQ9H9S4 337 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 GRHL1Q9NZI5 618 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 ABI3Q9P2A4 366 aa17.16■□□□□ 0.34
TMEM88-201ENST00000301599 TCRBV9S1A1TA0A576 114 aa17.15■□□□□ 0.34
TMEM88-201ENST00000301599 A1L4Q6 167 aa17.15■□□□□ 0.34
TMEM88-201ENST00000301599 FAM159BA6NKW6 160 aa17.15■□□□□ 0.34
TMEM88-201ENST00000301599 PSMD12O00232 456 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms