RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TEX9Q8N6V9 391 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 Q8NA96 180 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 OR56A3Q8NH54 315 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 ATP6V1E2Q96A05 226 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 MOCOSQ96EN8 888 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 TCTN2Q96GX1 697 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 PKP4Q99569 1192 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 CCDC28BQ9BUN5 200 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 IPPKQ9H8X2 491 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 ZBTB26Q9HCK0 441 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 GPRC5BQ9NZH0 403 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 HEY2Q9UBP5 337 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 EPHA6Q9UF33 1036 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 COLEC10Q9Y6Z7 277 aa20.11■□□□□ 0.81
SMCO4-201ENST00000298966 C2CD3Q4AC94 2353 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 CCDC22O60826 627 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 IDH3AP50213 366 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 ACY1Q03154 408 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 PTCHD3Q3KNS1 767 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 GGTA1PQ4G0N0 100 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 KANK2Q63ZY3 851 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 FAM91A1Q658Y4 838 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 CAPN13Q6MZZ7 669 aaPredicted RBP20.1■□□□□ 0.81
SMCO4-201ENST00000298966 ACAD11Q709F0 780 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 FITM2Q8N6M3 262 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 PNPLA2Q96AD5 504 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 C5orf34Q96MH7 638 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 NSUN5Q96P11 429 aaKnown RBP20.1■□□□□ 0.81
SMCO4-201ENST00000298966 PCBD2Q9H0N5 130 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 NOL11Q9H8H0 719 aaKnown RBP20.1■□□□□ 0.81
SMCO4-201ENST00000298966 AKIRIN1Q9H9L7 192 aaPredicted RBP20.1■□□□□ 0.81
SMCO4-201ENST00000298966 TRPS1Q9UHF7 1281 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 SRPK3Q9UPE1 567 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 PCM1Q15154 2024 aa20.1■□□□□ 0.81
SMCO4-201ENST00000298966 LRRC14BA6NHZ5 514 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 UBFD1O14562 309 aaKnown RBP20.09■□□□□ 0.81
SMCO4-201ENST00000298966 CEACAM4O75871 244 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 WDR47O94967 919 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 SLC16A8O95907 504 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 ERGP11308 486 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 ELAVL4P26378 380 aaKnown RBP20.09■□□□□ 0.81
SMCO4-201ENST00000298966 IMPA1P29218 277 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 IRX1P78414 480 aaPredicted RBP20.09■□□□□ 0.81
SMCO4-201ENST00000298966 ZNF33BQ06732 778 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 GPR18Q14330 331 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 GALNTL6Q49A17 601 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 SLC6A19Q695T7 634 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 ZFPM2Q8WW38 1151 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 CXorf40BQ96DE9 158 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 SLC41A2Q96JW4 573 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 C12orf66Q96MD2 445 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 PHF12Q96QT6 1004 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 MIPEPQ99797 713 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 RAB33BQ9H082 229 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 MYLK2Q9H1R3 596 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 SLC40A1Q9NP59 571 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 TRIM33Q9UPN9 1127 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 SLC5A6Q9Y289 635 aa20.09■□□□□ 0.81
SMCO4-201ENST00000298966 MTHFD1P11586 935 aaKnown RBP20.08■□□□□ 0.81
SMCO4-201ENST00000298966 FOLR1P15328 257 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 SERPINB3P29508 390 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 ARL4DP49703 201 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 PNLIPRP1P54315 467 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 MBOAT1Q6ZNC8 495 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 MILR1Q7Z6M3 343 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 MTDHQ86UE4 582 aaKnown RBP20.08■□□□□ 0.81
SMCO4-201ENST00000298966 HMGCLL1Q8TB92 370 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 MR1Q95460 341 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 ESAMQ96AP7 390 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 ERP27Q96DN0 273 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 MAELQ96JY0 434 aaKnown RBP20.08■□□□□ 0.81
SMCO4-201ENST00000298966 RILPQ96NA2 401 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 INSM2Q96T92 566 aaPredicted RBP20.08■□□□□ 0.81
SMCO4-201ENST00000298966 MEAF6Q9HAF1 191 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 ZFP69BQ9UJL9 534 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 PSMD13Q9UNM6 376 aa20.08■□□□□ 0.81
SMCO4-201ENST00000298966 IGHV5-51A0A0C4DH38 117 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 GOLGA8QA0A0J9YX86 632 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 GOLGA8OA6NCC3 632 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 GOLGA8NF8WBI6 632 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 OR7A17O14581 309 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 CPNE3O75131 537 aaKnown RBP20.07■□□□□ 0.8
SMCO4-201ENST00000298966 CLDN9O95484 217 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 TRAF3Q13114 568 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 KRT33BQ14525 404 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 KCNAB1Q14722 419 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 NR6A1Q15406 480 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 CYP2A13Q16696 494 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 C10orf62Q5T681 223 aaPredicted RBP20.07■□□□□ 0.8
SMCO4-201ENST00000298966 C1QL3Q5VWW1 255 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 CLNKQ7Z7G1 428 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 THOC6Q86W42 341 aaKnown RBP20.07■□□□□ 0.8
SMCO4-201ENST00000298966 SYTL1Q8IYJ3 562 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 RBMXL3Q8N7X1 1067 aaKnown RBP20.07■□□□□ 0.8
SMCO4-201ENST00000298966 SNX31Q8N9S9 440 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 FDCSPQ8NFU4 85 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 SPDYE1Q8NFV5 336 aaPredicted RBP20.07■□□□□ 0.8
SMCO4-201ENST00000298966 OR5AR1Q8NGP9 310 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 ACTRT2Q8TDY3 377 aa20.07■□□□□ 0.8
SMCO4-201ENST00000298966 ZNF480Q8WV37 535 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms