RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 DUSP26Q9BV47 211 aa13.66□□□□□ -0.22
C9orf3-202ENST00000297979 MS4A8Q9BY19 250 aa13.66□□□□□ -0.22
C9orf3-202ENST00000297979 MRPS30Q9NP92 439 aaKnown RBP13.66□□□□□ -0.22
C9orf3-202ENST00000297979 CCM2LQ9NUG4 571 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-202ENST00000297979 ZNF624Q9P2J8 865 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-202ENST00000297979 FBXL21Q9UKT6 434 aa13.66□□□□□ -0.22
C9orf3-202ENST00000297979 IGKV1-8A0A0C4DH67 115 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 A6NCN8 305 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 GABRR3A8MPY1 467 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 PRICKLE3O43900 615 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-202ENST00000297979 PEX1O43933 1283 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 SCN2BO60939 215 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 GBAP04062 536 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 GSNP06396 782 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 PIM1P11309 404 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-202ENST00000297979 F3P13726 295 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 HRH2P25021 359 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 ABATP80404 500 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
C9orf3-202ENST00000297979 GRAMD1BQ3KR37 738 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 KHDRBS2Q5VWX1 349 aaKnown RBP13.65□□□□□ -0.22
C9orf3-202ENST00000297979 TNIP2Q8NFZ5 429 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 OR10A6Q8NH74 314 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.65□□□□□ -0.22
C9orf3-202ENST00000297979 SNX19Q92543 992 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 SHDQ96IW2 340 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 PANX1Q96RD7 426 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 TPSD1Q9BZJ3 242 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 MYNNQ9NPC7 610 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 ARMC1Q9NVT9 282 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 WNT16Q9UBV4 365 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 PLXND1Q9Y4D7 1925 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 FAM170BA6NMN3 283 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 OR1F1O43749 312 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 TNFP01375 233 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 GPIP06744 558 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 KLK1P06870 262 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 TSPAN7P41732 249 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 STARD6P59095 220 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 AMIGO1Q86WK6 493 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 NRROSQ86YC3 692 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 TMEM102Q8N9M5 508 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-202ENST00000297979 C16orf78Q8WTQ4 265 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 LCN9Q8WX39 176 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 RLN3Q8WXF3 142 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 CCDC115Q96NT0 180 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 FOXQ1Q9C009 403 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 REEP4Q9H6H4 257 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 OR6C2Q9NZP2 312 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 ATP6V1HQ9UI12 483 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 BTBD3Q9Y2F9 522 aa13.65□□□□□ -0.22
C9orf3-202ENST00000297979 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-202ENST00000297979 IGHV1OR15-9A0A0B4J2B8 117 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 A0A1W2PPC4 97 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 TCRBV5S2A0A599 114 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 CCNDBP1O95273 360 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 TBX6O95947 436 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 PEBP1P30086 187 aaKnown RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 COX10Q12887 443 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 CYP51A1Q16850 503 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 GLYATQ6IB77 296 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 DTWD1Q8N5C7 304 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 FRMD1Q8N878 549 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 ZNF548Q8NEK5 533 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 OR2L3Q8NG85 312 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 JPH3Q8WXH2 748 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 AURKBQ96GD4 344 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 GUCD1Q96NT3 240 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 KAT8Q9H7Z6 458 aaKnown RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 SLC6A20Q9NP91 592 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 SPHK1Q9NYA1 384 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 AURKCQ9UQB9 309 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 TRBC2A0A5B9 178 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 PLPP1O14494 284 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 GGT1P19440 569 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 RPL3P39023 403 aaKnown RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 ANXA8L1Q5VT79 327 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 R3HCC1LQ7Z5L2 792 aaKnown RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 PDSS2Q86YH6 399 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 ADGRG5Q8IZF4 528 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 FAM160A2Q8N612 972 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 CATSPER1Q8NEC5 780 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 TTLQ8NG68 377 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 SUN5Q8TC36 379 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 LRTOMTQ8WZ04 291 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 TBC1D20Q96BZ9 403 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 NSMCE2Q96MF7 247 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 RPF2Q9H7B2 306 aaKnown RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 GPR27Q9NS67 375 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 BTNL2Q9UIR0 455 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 EXO1Q9UQ84 846 aaKnown RBP13.64□□□□□ -0.23
C9orf3-202ENST00000297979 DTNAQ9Y4J8 743 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
C9orf3-202ENST00000297979 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 GMNNO75496 209 aa13.63□□□□□ -0.23
C9orf3-202ENST00000297979 CHRM5P08912 532 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms