RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TBX6O95947 436 aaPredicted RBP20.45■□□□□ 0.86
SOX17-201ENST00000297316 HSPA13P48723 471 aa20.45■□□□□ 0.86
SOX17-201ENST00000297316 CHN2P52757 468 aa20.45■□□□□ 0.86
SOX17-201ENST00000297316 OR2A1Q8NGT9 310 aa20.45■□□□□ 0.86
SOX17-201ENST00000297316 PANX1Q96RD7 426 aa20.45■□□□□ 0.86
SOX17-201ENST00000297316 SORBS1Q9BX66 1292 aaKnown RBP20.45■□□□□ 0.86
SOX17-201ENST00000297316 SPHK1Q9NYA1 384 aa20.45■□□□□ 0.86
SOX17-201ENST00000297316 SDK1Q7Z5N4 2213 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 IGHV1OR15-9A0A0B4J2B8 117 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 GNG14A0A1W2PPG7 69 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 H0YJX3 145 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 CPSF4O95639 269 aaKnown RBP20.44■□□□□ 0.86
SOX17-201ENST00000297316 CELA2BP08218 269 aaPredicted RBP20.44■□□□□ 0.86
SOX17-201ENST00000297316 PEBP1P30086 187 aaKnown RBP20.44■□□□□ 0.86
SOX17-201ENST00000297316 CCR5P51681 352 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 YPEL5P62699 121 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 ATP6AP1Q15904 470 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 DPY19L1Q2PZI1 675 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 ZNF385BQ569K4 471 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 SYNPOQ8N3V7 929 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 PATE1Q8WXA2 126 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 FAM120BQ96EK7 910 aaKnown RBP20.44■□□□□ 0.86
SOX17-201ENST00000297316 Q9H521 79 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 MVB12BQ9H7P6 319 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.44■□□□□ 0.86
SOX17-201ENST00000297316 MDC1Q14676 2089 aaKnown RBP20.44■□□□□ 0.86
SOX17-201ENST00000297316 MYOCOSA0A1B0GUC4 107 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 PLOD2O00469 737 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 STARD6P59095 220 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 LAPTM5Q13571 262 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 GALNT18Q6P9A2 607 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 ABRAXAS1Q6UWZ7 409 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 CHERPQ8IWX8 916 aaKnown RBP20.44■□□□□ 0.86
SOX17-201ENST00000297316 ORAI3Q9BRQ5 295 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 DUSP26Q9BV47 211 aa20.44■□□□□ 0.86
SOX17-201ENST00000297316 TNFRSF10CO14798 259 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 FCGR1AP12314 374 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 CALRP27797 417 aaKnown RBP20.43■□□□□ 0.86
SOX17-201ENST00000297316 MYBPC1Q00872 1141 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 ZP2Q05996 745 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 INTS11Q5TA45 600 aaKnown RBP20.43■□□□□ 0.86
SOX17-201ENST00000297316 OR2L8Q8NGY9 312 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.43■□□□□ 0.86
SOX17-201ENST00000297316 NETO1Q8TDF5 533 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 ZFAND2BQ8WV99 257 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 NTN4Q9HB63 628 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 WASH6PQ9NQA3 447 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 FAM120CQ9NX05 1096 aaKnown RBP20.43■□□□□ 0.86
SOX17-201ENST00000297316 LCMT2O60294 686 aaKnown RBP20.43■□□□□ 0.86
SOX17-201ENST00000297316 HOXB3P14651 431 aaPredicted RBP20.43■□□□□ 0.86
SOX17-201ENST00000297316 PCSK2P16519 638 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 TRPC1P48995 793 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 CCR8P51685 355 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 MC1RQ01726 317 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 NHSL2Q5HYW2 709 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 ZNF621Q6ZSS3 439 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 ADCK2Q7Z695 626 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 SPRED1Q7Z699 444 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 ST13P4Q8IZP2 240 aaPredicted RBP20.43■□□□□ 0.86
SOX17-201ENST00000297316 CLEC4FQ8N1N0 589 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 RAB42Q8N4Z0 105 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 ABHD11Q8NFV4 315 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 OR4E2Q8NGC2 313 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 SLC6A18Q96N87 628 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 TRIM4Q9C037 500 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 WNT16Q9UBV4 365 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 KLHL20Q9Y2M5 609 aa20.43■□□□□ 0.86
SOX17-201ENST00000297316 MRPS17Q9Y2R5 130 aaKnown RBP20.43■□□□□ 0.86
SOX17-201ENST00000297316 STATHP02808 62 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 THEGLP0DJG4 465 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 ENGP17813 658 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 SLC19A1P41440 591 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 ASMTP46597 345 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 RABIFP47224 123 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 HNRNPFP52597 415 aaKnown RBP20.42■□□□□ 0.86
SOX17-201ENST00000297316 EIF2B5Q13144 721 aaKnown RBP20.42■□□□□ 0.86
SOX17-201ENST00000297316 KRT78Q8N1N4 520 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 PNPT1Q8TCS8 783 aaKnown RBP20.42■□□□□ 0.86
SOX17-201ENST00000297316 FAM162AQ96A26 154 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 PELI2Q9HAT8 420 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 A6NCN8 305 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 CLIC1O00299 241 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 UPK1AO00322 258 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 STK25O00506 426 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 CREG1O75629 220 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 LDLRP01130 860 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 CSNK1G2P78368 415 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 MUC3AQ02505 3323 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 PRDX1Q06830 199 aaKnown RBP20.42■□□□□ 0.86
SOX17-201ENST00000297316 C11orf91Q3C1V1 193 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 LIN52Q52LA3 116 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 CPTPQ5TA50 214 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 TBPL2Q6SJ96 375 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 GPR155Q7Z3F1 870 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 ADHFE1Q8IWW8 467 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 FBXL6Q8N531 539 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 NCLNQ969V3 563 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 AIF1LQ9BQI0 150 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 OSBPL11Q9BXB4 747 aa20.42■□□□□ 0.86
SOX17-201ENST00000297316 PCBD2Q9H0N5 130 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms