RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 A0A1W2PRU2 124 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 GABRR3A8MPY1 467 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 CCRL2O00421 344 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 MYL12BO14950 172 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 TNFRSF21O75509 655 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 GALTP07902 379 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 CR2P20023 1033 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 CSNK1DP48730 415 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 RING1Q06587 406 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZMAT1Q5H9K5 638 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 CLEC12AQ5QGZ9 265 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 CRTC1Q6UUV9 634 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 USP43Q70EL4 1123 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 PRSS48Q7RTY5 328 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 MRPS31Q92665 395 aaKnown RBP12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 EXOSC8Q96B26 276 aaKnown RBP12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 LHX3Q9UBR4 397 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 PCDHGB6Q9Y5F9 930 aa12.82□□□□□ -0.36
TNFRSF21-201ENST00000296861 AGAP5A6NIR3 686 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 FAM47E-STBD1D6RA91 191 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 PSIP1O75475 530 aaKnown RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLC16A8O95907 504 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TSPAN19P0C672 248 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 SDHBP21912 280 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CNR2P34972 360 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ACLYP53396 1101 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TAS2R50P59544 299 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 MBTPS1Q14703 1052 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TMPRSS11AQ6ZMR5 421 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 MFSD4AQ8N468 514 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TCEANCQ8N8B7 351 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 B3GNT7Q8NFL0 401 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CSGALNACT1Q8TDX6 532 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ARPC5LQ9BPX5 153 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CLN6Q9NWW5 311 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 IL20RAQ9UHF4 553 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TEKT2Q9UIF3 430 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CCDC88CQ9P219 2028 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TRBC2A0A5B9 178 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 LRRTM2O43300 516 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 URODP06132 367 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 RYKP34925 604 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CNTN1Q12860 1018 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 GAB1Q13480 694 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 IFI44LQ53G44 452 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 AGTRAPQ6RW13 159 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CCDC71Q8IV32 467 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZZZ3Q8IYH5 903 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 PCSK9Q8NBP7 692 aaKnown RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZNF486Q96H40 463 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZNF300Q96RE9 604 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 RIOK2Q9BVS4 552 aaKnown RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ASPNQ9BXN1 380 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLIRPQ9GZT3 109 aaKnown RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 P2RY12Q9H244 342 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 SERHLQ9NQF3 203 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 NOX1Q9Y5S8 564 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 A6NIN4 97 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 GLOD5A6NK44 160 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TSPAN6O43657 245 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ERAL1O75616 437 aaKnown RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 BCHEP06276 602 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 HLA-EP13747 358 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 AMD1P17707 334 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CD6P30203 668 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 SNRPD1P62314 119 aaKnown RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 LMAN2Q12907 356 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 IL18R1Q13478 541 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZNF284Q2VY69 593 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 RRM2BQ7LG56 351 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZSWIM9Q86XI8 627 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 NPAS3Q8IXF0 933 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 LINC01599Q8WXQ3 324 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CLP1Q92989 425 aaKnown RBP12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 RNF186Q9NXI6 227 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 TRPS1Q9UHF7 1281 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CLEC2DQ9UHP7 191 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CLCA3PQ9Y6N3 262 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 SIP14410 1827 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 XIRP2A4UGR9 3374 aa12.81□□□□□ -0.36
TNFRSF21-201ENST00000296861 CPNE3O75131 537 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 WBP4O75554 376 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 KCNK2O95069 426 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 CDRT1O95170 752 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 CATP04040 527 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 EIF2DP41214 584 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 PIK3CBP42338 1070 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 PPM1FP49593 454 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 MLLT1Q03111 559 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 SRSF11Q05519 484 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 TBRG1Q3YBR2 411 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZNF740Q8NDX6 193 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ENKURQ8TC29 256 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 DOK4Q8TEW6 326 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 PHF21AQ96BD5 680 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 HTATIP2Q9BUP3 242 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 EQTNQ9NQ60 294 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms